| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1188 |
|---|
| Symbol | |
|---|
| ID | 3624535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1460325 |
|---|
| End bp | 1462232 |
|---|
| Gene Length | 1908 bp |
|---|
| Protein Length | 635 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637700079 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_304736 |
|---|
| Protein GI | 73668721 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCTA ATGGAAAATC AATTGCAAAA ATTATGGGAT CTATTTTGTT TATATTAATG
ATCTCAACTT CAATTACCGC AGGAGCAGCT TCCTGTGATA ATTCTGTAAA GTTTGCAACA
GACTGTGAGC AAGCAAATTG TAGCTTCGCA AATTGCAGCT TAGCAAATTG TAGCTTCGCA
AATTGCAGCT TAGTAAATTG TAGCTCAGCA AATTGTAGCT TAGCAAATTG TAGCTCTGAA
TTATGCGGCT GTGTTTCTAT TGTAGATGGA AAACAGAACA TAGATTGTAA CAAGGAATGT
ACCTCTTGTA ATTGCGAGTC CGTTACAGAC TGTGAGCAAG CAAATTGTAG CTTCGCAAAT
TGTAGCTTAA CAAATTGCAG CTTAACAAAT TGCAGCTTAG TAAATTGTAG CTTCACAAAT
TGTAGCTCAA CAAATTGTAG CTCTGAATTA TGCGGCTGCG TTGATACCTC AACAGAAGAA
AAGACATGTA GCAATGCTGC AGATACTTCA ACAGAAGAAA AGGCATGTAG CAATGCTGCA
GATACTTCAA CAGAAGAAGA GACATGTGAC AACGCTGTAG ATACCTCAGC AGATACTTCA
ACAGAAGAAA AGGCATGTAG CAATGCTGCA GATACTTCAA CAGAAGAAGA GACATGTGAC
AACGCTGTAG ATACCTCAGC AGAAACTTCG ACAGAAGAAA AGACATGCAG CAATGCTGCA
GATACTTCAA CAGAAGAAGA GACATGTGAC AACGCTGTAG ATACCTCAGC AGAAACTTCG
ACAGAAGAAA AGACATGCAG CAATGCTGCA GATACTTCAA CAGAAGAAAA GACATGTAGC
AATGCTGCAG ATACTTCAAC AGAAGAAAAG ACATGTAGCA ATGCTGCAGA TACTTCAACA
GAAGAAAAGA CATGTAGCAA TGCTGCAGAT ACTTCAACAG AAGAAAAGAC ATGTAGCAAT
GCTGCAGATA CTTCAACAGA AGAAAAAACA TGTAGCAATG CTGCAGATAC TTCAACAGAA
GAAAAAACAT GTGACAACGC TGTAGATACC TCAGCAGAAA CTTCGACAGA AGAAGAGACA
TGTAGCAATG CTGCAGATAC TTCGACAGAA GAAAAAACAT GTGACAACGC TGTAGATACC
TCAGCAGAAA CTTCGACAGA AGAAAAGACA TGCAGCAATG CTGCAGATAC TTCAACAGAA
GAAGAGACAT GTGACAACGC TGTAGATACC TCAGCAGAAA CTTCGACAGA AGAAGAGACA
TGTAGCAATG CTGCAGATAC TTCGACAGAA GAAAAAACAT GTGACAACGC TGTAGATACC
TCAGCAGAAA CTTCGACAGA AGAAAAGACA TGCAGCAATG CTGCAGATAC TTCAACAGAA
GACAAGACAT GTAATAATGC TGCAGAAACT TCAACAGAAG AAGAGACATG TGACAACGCT
GTAGATACCT CAGCAGAAAC TTCGACAGAA GAAAAGACAT GCAGCAATGC TGCAGATACT
TCGACAGAAG AAAAAACATG TGACAACGCT GTAGATACCT CAGCAGAAAC TTCGACAGAA
GAAAAGACAT GCAGCAATGC TGCAGATACT TCAACAGAAG AAAAAACATG TAGCAATGCT
GCAGATACCT CAACAGAAGA AAAAACATGT AGCAACGCTG TAGATACTTC AACAGAAGAA
GAGATATGTG ACAACGCTGT AGATACCTCA GCAGAAACTT CGACAGAAGA AGAGACATGT
AGCAATGCTG CAGATACTTC GACAGAAGAA AAAACATGTG ACAACGCTGT AGATACCTCA
GCAGAAACTT CGACAGAAGA AAAGACATGC AGCAATGCTG CAGATACTTC AACAGAAGAC
AAGACATGTA ATAATGCTGC AGAAACTTCA ACAGAAGAAT GTAAATAA
|
|---|
| Protein sequence | MNSNGKSIAK IMGSILFILM ISTSITAGAA SCDNSVKFAT DCEQANCSFA NCSLANCSFA
NCSLVNCSSA NCSLANCSSE LCGCVSIVDG KQNIDCNKEC TSCNCESVTD CEQANCSFAN
CSLTNCSLTN CSLVNCSFTN CSSTNCSSEL CGCVDTSTEE KTCSNAADTS TEEKACSNAA
DTSTEEETCD NAVDTSADTS TEEKACSNAA DTSTEEETCD NAVDTSAETS TEEKTCSNAA
DTSTEEETCD NAVDTSAETS TEEKTCSNAA DTSTEEKTCS NAADTSTEEK TCSNAADTST
EEKTCSNAAD TSTEEKTCSN AADTSTEEKT CSNAADTSTE EKTCDNAVDT SAETSTEEET
CSNAADTSTE EKTCDNAVDT SAETSTEEKT CSNAADTSTE EETCDNAVDT SAETSTEEET
CSNAADTSTE EKTCDNAVDT SAETSTEEKT CSNAADTSTE DKTCNNAAET STEEETCDNA
VDTSAETSTE EKTCSNAADT STEEKTCDNA VDTSAETSTE EKTCSNAADT STEEKTCSNA
ADTSTEEKTC SNAVDTSTEE EICDNAVDTS AETSTEEETC SNAADTSTEE KTCDNAVDTS
AETSTEEKTC SNAADTSTED KTCNNAAETS TEECK
|
|---|
| |