| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1183 |
|---|
| Symbol | |
|---|
| ID | 3624530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1453788 |
|---|
| End bp | 1454747 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637700074 |
|---|
| Product | GTP cyclohydrolase |
|---|
| Protein accession | YP_304731 |
|---|
| Protein GI | 73668716 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1469] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00294] conserved hypothetical protein TIGR00294 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACATT GCACTTTCAA CCTCCCGGAC GTCCAGGCCA GCAAACCAAG CATAGCTATA
AACCTTACCC GTGTCGGGGT AACAAATGTT AAAAAACTCG TTGAAATCAA GCGAAAAGAC
AAACGTCCCA TCGTACTTAT TTCAACTTTT GACGTTTTTG TTGACCTGCC CTCGGACCGA
AAGGGAGCAA ATCTCTCTAG GAACTTCGAA GCTGTAGATG AGGTACTGGA AAAAATACTC
AGTATGCCCG TATACGAAAT TGAGCAGCTT TGCAGTGATA TCGCACACAA CTTGCTTGGC
AGACATGAAT ATGCCAATCA GGCAGAAGTT CGGATGACAA GCGAATATAT GATCAGGCGT
GCGTCCCCTG CCACCGGGAT CAAATGTCAG GAAGTAGTGA ATATCTTTGC TGAAGCGTCT
GCTGTAAGAG GACAGGGAAA TGATGACTAT TTTGATGTAA AGAAACTGAT AGGTGCCGAA
GTTGTAGGAA TGACAGCCTG CCCCTGTGCT CAGGAGATCA TGCGAGATAA AGCTGCAAAT
GAGCTTTCAG AACTTGGAGT CGATAAAGAC ACGATTATAA AATTCCTGGA AAGGGTTCCC
ATGGCTACCC ATAACCAGCG AGGAAGAGGA ATTATATCAA TCAAGGTAGC ACATGATTTT
GATGTTTCCC TCGAAAGCAT TATCAGTATT ATTGATCACT CTATGAGTTC CAGCGTATAT
GAGGTCTTGA AACGCGCAGA CGAAAAAGTC GTTGTGGAAA CTGCACATAT GAACCCGAAA
TTTGTGGAAG ACTGTGTAAG AACCATGGCA GACAACGTCG TAAAAGAATT TCCGAATCTT
CCTGATAATG CAGTAATCAC CATCAAGCAA ACTAATGAGG AAAGTATTCA CAGGCACAAT
GCTTATGCCG AAAGAGTTGC CCTGATGGGA GATCTCAGGT CGGAAATTAA TCACTGTTAA
|
|---|
| Protein sequence | MEHCTFNLPD VQASKPSIAI NLTRVGVTNV KKLVEIKRKD KRPIVLISTF DVFVDLPSDR
KGANLSRNFE AVDEVLEKIL SMPVYEIEQL CSDIAHNLLG RHEYANQAEV RMTSEYMIRR
ASPATGIKCQ EVVNIFAEAS AVRGQGNDDY FDVKKLIGAE VVGMTACPCA QEIMRDKAAN
ELSELGVDKD TIIKFLERVP MATHNQRGRG IISIKVAHDF DVSLESIISI IDHSMSSSVY
EVLKRADEKV VVETAHMNPK FVEDCVRTMA DNVVKEFPNL PDNAVITIKQ TNEESIHRHN
AYAERVALMG DLRSEINHC
|
|---|
| |