| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1131 |
|---|
| Symbol | |
|---|
| ID | 3625848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 1399525 |
|---|
| End bp | 1400538 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637700022 |
|---|
| Product | dolichyl-phosphate mannose synthase related protein |
|---|
| Protein accession | YP_304679 |
|---|
| Protein GI | 73668664 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACC CTTTCGTTTC AGTCGTAGTA GGTATTCGTA ATGAAGAAAA ATTTATTGAA
GAATGTATTG AGTCACTTAT TAATCTAGAT TACCCGAGAG ATTCTTACGA GATTATTATC
ATTGATGGTA TGTCCACCGA CAAAACGCGA GATATAGTAC AAAAATATCC TGTCAAACTT
CTTTTGAACG AAAAAAAGAA TGTTGCTGCG GCAAGAAACC TTGGCGTAGA GAATGCCAGG
GGAGAACTTG TCGCATTTAC TGACGGAGAC TGTAAGGTCG ATCCTCAGTG GTTGAAAGCT
CTTGTCCATG AAATGCAAAC TTCTCCAGAT GATGTTGTGT GTTTTGGAGG CCCTAACCTG
ATCTTTGACA CTGATCCTGT ATTTGGCAGG GTGGTGGGAT ATGCCCAAGA ATCTTTCTTG
GGGTCTGGAG GTTCGGCTCA GTCCAAAAAC TCCACAAAAA AGCATTATGT CAGCTCTCTT
CCTAATTGCA ATGCAATGTA CAAAAAAGCT GCAATTAAGG AAGTTGGAGG TTTTGATGAG
CGGTTTGTGG TAGGTCAGGA CGGGGACCTG AACTACAGAA TCGGTAAGAA GGGTAACAAG
TTTTTGTATA TCCCGAATGC ACAGGTCCTG CACCATAGAA GAGGAACTCT CAAGTCCTTT
TCCGTAAGGA TGTTTAAATA TGGTATGTGG ATGGCAGAAC TTTTCAAGAA GCATGGAGAA
TTTGTCCGTT GGTATGCTTT TTTGCCTTCG ATTGCCACCT TGTTTGCAGT CATTTTGCTT
ATCGCGTCTA TCAAGTATTC CACTGCAGGC CTGCTTCTTC TTGTACTCGT GACCATATAT
TTTATTCTTG TTTTTATTAC CTCAATCCAG GTTACCTATA AAATGAAATC AAAATACGGT
CTTTTTGCTC TTTTTATTAT TCCTGTGCAG CACGTTGCTT ATGGACTGGG GTTTTTGTAC
AGCTTTACAA ATTCTCCGTT GACCTCAAAA GTCAGTTCCT GTTCAAGTAC TTAA
|
|---|
| Protein sequence | MKYPFVSVVV GIRNEEKFIE ECIESLINLD YPRDSYEIII IDGMSTDKTR DIVQKYPVKL
LLNEKKNVAA ARNLGVENAR GELVAFTDGD CKVDPQWLKA LVHEMQTSPD DVVCFGGPNL
IFDTDPVFGR VVGYAQESFL GSGGSAQSKN STKKHYVSSL PNCNAMYKKA AIKEVGGFDE
RFVVGQDGDL NYRIGKKGNK FLYIPNAQVL HHRRGTLKSF SVRMFKYGMW MAELFKKHGE
FVRWYAFLPS IATLFAVILL IASIKYSTAG LLLLVLVTIY FILVFITSIQ VTYKMKSKYG
LFALFIIPVQ HVAYGLGFLY SFTNSPLTSK VSSCSST
|
|---|
| |