| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1125 |
|---|
| Symbol | |
|---|
| ID | 3625842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 1386028 |
|---|
| End bp | 1388001 |
|---|
| Gene Length | 1974 bp |
|---|
| Protein Length | 657 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637700016 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_304673 |
|---|
| Protein GI | 73668658 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.837381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAAA GAGAATTAGG GATCTTTTTC TTGATAAGTT GCCTTATTCT TGCAAACGTT
CCTACTGTTT TATGCCGAAG TCCTGCACCA ACTGTTTATG TTGCAGGAGA TGGTAGTGGG
GATTTTAACT GCGATGGAAA AGATGACCAT GTACAGATAA ATCAGGCCCT TAAGTTTGTG
GCCGGGAACT CTAAATATAC TACTGTTCAC CTCAAAGGTC CTTTTACGTA TGTTATTGAC
GATACTCTTC TCATCGGCAG CAATACTATT CTTGAAGGGG ATTCAAACGC TGTTATTAAA
CTGGCTAACA ACGCAGGTTG GGCTACAATG AAACCTATGA TCAAGCAGAT GAGCAGTTCC
GGAAATAACA ACATTGTAAT AAGAGGGTTT GAGATTAATG GAAACCATGA CGGTAATCCT
AAAGTTTCTA AGGGTAAAGG GTACTATAAT ATGATTTACT TTACTAACTG TAATAACGTA
AAAGTATACA AAATGTATAT GCACGATGGA CTTGGAGACG GGCTGAGGAT AAAATACGGA
AAAAATATTA AATTTTATAA AAACAGGATA TACAAACTCG GGCACGACGG TCTGTTTGCA
ATTCAGTGTA AGAACGTAAA GGCCTGGAAA AACACAATAA CCTGTAGAAC TAACAGCGGT
CTTAGAATCT GGAACTCAAA CCATGTAAAA TTATATAATA ATGTAATCAA TTCTTTCTAT
CACTGGAGTG CAGGCGGGGC GGCCATTCAA ATAGAAAAGT CTGCAGGAAT GATGAATGAT
ATAGAGATCT ATGATAATAC TATATCTAAC ACCTATGGCC CTGGAATCTG GATTTTCAAC
TATGATACCT CTGCTACTAA AAATCAAGGG AAAAATGTTC ATATTTATAA TAATGTCTTC
TACGGTACAG GTACCAATCC GAGCATTACC TGGGTTGGAG GTATTGTAGC CAGTGGGTTC
CATGATACTC TAATTGAAAA TAATATTTTT GACGGCGTAT ACCATGCTGC TGTTATTCAT
ATGTATCCAG AAGCTTATTC TCCAAAGTAC TCGTCAAAAT ACACAACAAT TGTCCGTAAC
AACATAATTG TAAACACTCA GAAACGTACA AAGGCCCCTA GTGGAACAGG GTATGCAGTG
ATAAATTATC TTACTAAAAA CCATAACTTT GTGCTGGAGA ATAACTGCCT TTACAAGAAT
TCAGCAGGCA AATATAAAGG CTGCACTTCG AAATCTGACA TATACTTAAA CCCATTATTT
GTAAACCAGA AATACCATGA TTATCACCTC CAGTCAGTTG CAGGTCACTG GAATGGAAAA
AAATGGGTTA AAGACAAAGT TAGTTCTCCC TGTATTGATT CCGGATATGC CTCGTCTGAT
TATTCTAAAG AACCGGAAAA TAATGGGAAC AGGATCAACA TAGGAAGATA TGGAAACACA
ATCTATGCTT CACTGTCATC GAGTTCAAGA GTAAAGACTG TGCAGTCTTC GTTAACAGAC
TATATCTCCG AAGCTACAAA TGAGACTGAT GAAGATCTTA ACTTTACGGA GGAAGTTTTT
GACGTGGACG AAGATAATTG CACATACTCT GAAGATCTTT CTATCGACAC ACAGAGCCTG
GTTATCGATT CAATTCCCAA AACTACAGTT AAGATTGGAG AAACTTTGAA CTTTACAGTA
AAAGCTTCTG ATGTGAATGG AGGCAATCTT ACCTTTTCAG CATCTGCTCT TCCTGAAGGC
GCAAGTTTTG ACGAAACAGG GATTTTTAAC TGGACGCCTT CAGAAGGACA GGAAGGAATA
TACAAGATAT ATTTTGAAGT AAGCGATGGT ATTTTCAAAG ATTCTGAAGG TGCAATAATA
AGTGTGGTTG AAGAAGACTC TTTGAACCTT TCTAATGTGT ACGACAGCTA CATTTACGAA
GTATCTCCTG AAGATCCTTG TTTGAATAAT TTATCTTTCG GATTGGAGGA ATAG
|
|---|
| Protein sequence | MLKRELGIFF LISCLILANV PTVLCRSPAP TVYVAGDGSG DFNCDGKDDH VQINQALKFV
AGNSKYTTVH LKGPFTYVID DTLLIGSNTI LEGDSNAVIK LANNAGWATM KPMIKQMSSS
GNNNIVIRGF EINGNHDGNP KVSKGKGYYN MIYFTNCNNV KVYKMYMHDG LGDGLRIKYG
KNIKFYKNRI YKLGHDGLFA IQCKNVKAWK NTITCRTNSG LRIWNSNHVK LYNNVINSFY
HWSAGGAAIQ IEKSAGMMND IEIYDNTISN TYGPGIWIFN YDTSATKNQG KNVHIYNNVF
YGTGTNPSIT WVGGIVASGF HDTLIENNIF DGVYHAAVIH MYPEAYSPKY SSKYTTIVRN
NIIVNTQKRT KAPSGTGYAV INYLTKNHNF VLENNCLYKN SAGKYKGCTS KSDIYLNPLF
VNQKYHDYHL QSVAGHWNGK KWVKDKVSSP CIDSGYASSD YSKEPENNGN RINIGRYGNT
IYASLSSSSR VKTVQSSLTD YISEATNETD EDLNFTEEVF DVDEDNCTYS EDLSIDTQSL
VIDSIPKTTV KIGETLNFTV KASDVNGGNL TFSASALPEG ASFDETGIFN WTPSEGQEGI
YKIYFEVSDG IFKDSEGAII SVVEEDSLNL SNVYDSYIYE VSPEDPCLNN LSFGLEE
|
|---|
| |