Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1123 |
Symbol | |
ID | 3625840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 1380116 |
End bp | 1381582 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637700014 |
Product | transporter |
Protein accession | YP_304671 |
Protein GI | 73668656 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCATATC AAAAGTTTGC AAAGGATGTT GGTTTTATCG GGACAGTTCA GGTACTTACA AGCCTGGGAA CTTTTTTCCT CCTTCCGATA ATCACAAAAA CCCTTGGGAC ATACGACTAT GGACTCTGGG CCCAGATCAA TACCACTGTA TCTCTCATCT CTCCCCTCGC ACTGATGGGC CTCTCTATGG GTTTTGTCAG GTTTTTATCT TCTGAAACGG AACCCAAAAT AATAAGAGAA GCAGTATATT CAATTCTCTT TTTTGTAACT ATATCCGGTC TGTTGGCCTC ATTTTTACTC TATACGTTTG CAGAGCCTCT TGCTACTTTC GGTTTTAAAG ACCCTCATGC AACTTATTTT ATCCAGGCAG GTTCCCTTTT AATTCTCCTG ACTGTAATTG AGTCTATATC TCTTTTTTAT TTCAGGATTT TCAGGCAGAT TCAGACATTT TCTTACTTAA CCCTTTTTGA AACGTTTGGA AAATTGTTTT TTATTCTTTT TCTTCTCAAA ATGGGATACG GGCTTCTTGG TGTAATCGCG GCTACTCTAC TTGTACAGGG CTCCATTTTT TTAATTTCTC TTCTGATGAT CATATCACAG ATAGGATTCG TTATCCCGCG ATTTACTTAC ATAAAAGAGT ATTTGCAATT TTCTCTACCG TTAACTCCCA ATTCACTTGT AAGGTGGATT ACAGAATCAA GTGACAGATA TATGGTTACT TATTTTCTCG GCCTTAGAAG CGTGGGCGTA TATTCGGCAG CCTGCTCAAT TGGCAGTCTT ATACAGCTTT TTGTAAGCTC TCTTCAGCTC ATTCTTCTTC CCGAGTTATC AAAGCTTTTC GATGAAAATA AAATGGATGA AGTAAGAATT TGTATGTCTC ATTCTCTAAG ATATTTCCTT CTCTTCTCAA TTCCTGCAGT CTTCGGTCTC TCAGCTCTTG CAAAACCTTT GCTTGGGATT CTTACCACTG ACGATTTTCT TTCGGGCTGG CTTGTGATTC CCATTATTGC CTTCTCAGGT CTTCTGGCAG GAATCTTCCA GATATTTGTC AACACAATGC TCCTTATCAA GCAAACAAAA ACTGCGACCT ACATTAATAT TGTTGCAGCA GTTTCGAATG TATTGATTAA CCTTCTACTG ATACCTTCCA TTGGAATTGT TGGAGCCTCA TTGTCAACCT TATTTTCTTA CTTTTTAATG GCTGTGCTTT GTATGCATAT TTCCTTGAAA CACTTTAAAC TTGATTTTTA TCTTCATGAT ATTGCAAAAA GCGTTCTGTC TTCAATAGTT ATGTATCTCT TTGTTTCCTA CTTCGCTATC TTAAGCATCG TTGAGCTTTT TGAGATTGCA GGTATGGGTG TACTTATCTA TCTGGTTATG ATGTTCCTAG TAGGCGGATT CACAGACCAT GAACTTTCTC TAATACGAAG GTACTTATTC AGAGTCAAAA GCGAAGTCAA ACAGTAA
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Protein sequence | MSYQKFAKDV GFIGTVQVLT SLGTFFLLPI ITKTLGTYDY GLWAQINTTV SLISPLALMG LSMGFVRFLS SETEPKIIRE AVYSILFFVT ISGLLASFLL YTFAEPLATF GFKDPHATYF IQAGSLLILL TVIESISLFY FRIFRQIQTF SYLTLFETFG KLFFILFLLK MGYGLLGVIA ATLLVQGSIF LISLLMIISQ IGFVIPRFTY IKEYLQFSLP LTPNSLVRWI TESSDRYMVT YFLGLRSVGV YSAACSIGSL IQLFVSSLQL ILLPELSKLF DENKMDEVRI CMSHSLRYFL LFSIPAVFGL SALAKPLLGI LTTDDFLSGW LVIPIIAFSG LLAGIFQIFV NTMLLIKQTK TATYINIVAA VSNVLINLLL IPSIGIVGAS LSTLFSYFLM AVLCMHISLK HFKLDFYLHD IAKSVLSSIV MYLFVSYFAI LSIVELFEIA GMGVLIYLVM MFLVGGFTDH ELSLIRRYLF RVKSEVKQ
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