Gene Mbar_A1111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1111 
Symbol 
ID3627522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1366421 
End bp1368358 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content36% 
IMG OID637700002 
Producthypothetical protein 
Protein accessionYP_304659 
Protein GI73668644 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.238053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAACTG TAAGAGGATA CGCGGGGAGA CTTACAACAA ATTTGGATGT GATTCTCAGC 
GTCATGGGAT TCGGTTTAGG ATTATTAATT ATTTCTTTGT ACTACATCAT CGACCTGAAC
CAGAAAGATA TTGGAATTGC TATTCTGTCC TCCTGTTTGA TCTACTTTAT ATTTAGAAAT
AAATTTAAGA GTGAGGCCGC AATATCTTCC CGAGAAAACA AATTTAAAAG TATACTGGGA
ATCTCGTTTT ATCTCATTTT TCTGGCATGC GTTTTTATAT ATAGCACTAG TTTATATTAC
AGACCTATAT CTTCCTTTAT ATTGATATGT ATCCTTGCAG CTATTATCGC CTCCCAGATT
CTTTATGTTA GAGAGGGAGA CGGAGTGAAC TCTCTATTAT TGCAGATATT CCTGCTATCA
ATTCTCATCA GAGTTGGAAT TTTTTATAAT TTTCCAAGTT TGATGGGCTA TGATGCTTAT
TTCCATGCCA GTATGTCACG AGCAATTACT GATACCGGAT TTGTTGCTCC TATTGAAACA
AGCAGTAAGT ACTTCTACTA CCCTCTTTTT CATGTTTTTG TCTCAATTAT CCAGGTAATG
GGTGAAACCG ATATCAAAGA CGCAATATTT TATTCCATAG GGTTTGCCAG TGTTCTCAGT
ACAGTAGGCG TTTACCTAGT AGGAAAAAAA ATTGAAGGCA TTCAGATGGG TTTGCTGGCA
ACATTATTAA TAAACTTAAA TAATCATAAT ATCGTTGCAG GCATTACAAA TATAACTCCT
GGTTCTCTTG TTCTTTGCTA TTTTATATTC ATTATATACG CGATCTTTAG CGAGAAACAG
AGCTTGAGAT ATACAGGATT CATTCTGTTA ACTACTATTC TAATGGTTCT GACCCACCAG
TTGACAACTT TTGTAGTATT TCTTTCTTTA GTCTCAATTT GTGCAGGCAA ATATCTGCAC
AATCGTGTAT ATAAAAGTCT TTTCGTGAAA ATAAACAGTT TTAATTATAT CCTCTTTTTT
GTTATTAGTT TACAAACATA CTGGATGTTC ACTTATGTTA ACTCAAATAC CTCGTTTCTT
GAAATGGTTC TCAGTCCTCT TATGGATGTC CTTCAAATCG GATCAAGCTA CTCAAGTGAT
GAACTTATTA TGGGTTCCGT AAATAATCAG GAAACACTGG AAACGCTCTT ACTCCATATA
AGCTATCTTG CTCTACCTTT TTTCGCAATA GGAGGAGTAT TGGCATGGCT TTCTCGCGAA
GATATCAAAA AAGTTAATAA GTTTTCTATT GCTTTAGTTG TTATAATCCT GTACGGTCTT
GCTTATGGAA TTCCTTTACT TGGAATGAGG AATTTCCTTA CAAGCCGATG GTTCCCACTG
ATAGCCGTGT TCCTGGCACT TGTATCCGCC TCATATATGT TGAAATTAGT AAGTCTCTTT
AACTCAAAAA AAGCAAGGAT ACCTGTGATG TTCACAATCA TTCTTCTATT TTCGTTTGTA
ATGGTTACAA CACCAGGCAT AAATAAAGAC AACCCACTTG TAGCAAAGGA CACAACCGTA
AGAAACCAGT TTAAAAGTAT TGAAATCGAG GCCATTAAAA CAGTAACCGA AAAGTGCTCT
GGAAATATTC TGATGGATTC CCCCTATGAC AGTTGTCTTT TTTACAGGGA CAGAGCATAT
GATTCCAGTA ACGCAACATA TTTTAACATT CAGCATATAC AGACTGGAGA GATTGATGGC
AGTCCTACGA TTTTGCTTAG AAAGTCAACT GTTAAAGAAC CTGTCTCTAT CAATGATCCT
GAACGCTATG GAGTAAATAT TATCCAGACA TTGCCAGAGG GATTTTTCAA CAGATTCAAC
ACACACGATT ATGCCAGAGT ATATGATAAC GACGAGGTAT TTGCTTACAC AAAGGAAGGA
AAAACGGCCA GAAACTAA
 
Protein sequence
MVTVRGYAGR LTTNLDVILS VMGFGLGLLI ISLYYIIDLN QKDIGIAILS SCLIYFIFRN 
KFKSEAAISS RENKFKSILG ISFYLIFLAC VFIYSTSLYY RPISSFILIC ILAAIIASQI
LYVREGDGVN SLLLQIFLLS ILIRVGIFYN FPSLMGYDAY FHASMSRAIT DTGFVAPIET
SSKYFYYPLF HVFVSIIQVM GETDIKDAIF YSIGFASVLS TVGVYLVGKK IEGIQMGLLA
TLLINLNNHN IVAGITNITP GSLVLCYFIF IIYAIFSEKQ SLRYTGFILL TTILMVLTHQ
LTTFVVFLSL VSICAGKYLH NRVYKSLFVK INSFNYILFF VISLQTYWMF TYVNSNTSFL
EMVLSPLMDV LQIGSSYSSD ELIMGSVNNQ ETLETLLLHI SYLALPFFAI GGVLAWLSRE
DIKKVNKFSI ALVVIILYGL AYGIPLLGMR NFLTSRWFPL IAVFLALVSA SYMLKLVSLF
NSKKARIPVM FTIILLFSFV MVTTPGINKD NPLVAKDTTV RNQFKSIEIE AIKTVTEKCS
GNILMDSPYD SCLFYRDRAY DSSNATYFNI QHIQTGEIDG SPTILLRKST VKEPVSINDP
ERYGVNIIQT LPEGFFNRFN THDYARVYDN DEVFAYTKEG KTARN