Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1111 |
Symbol | |
ID | 3627522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1366421 |
End bp | 1368358 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637700002 |
Product | hypothetical protein |
Protein accession | YP_304659 |
Protein GI | 73668644 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.238053 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAACTG TAAGAGGATA CGCGGGGAGA CTTACAACAA ATTTGGATGT GATTCTCAGC GTCATGGGAT TCGGTTTAGG ATTATTAATT ATTTCTTTGT ACTACATCAT CGACCTGAAC CAGAAAGATA TTGGAATTGC TATTCTGTCC TCCTGTTTGA TCTACTTTAT ATTTAGAAAT AAATTTAAGA GTGAGGCCGC AATATCTTCC CGAGAAAACA AATTTAAAAG TATACTGGGA ATCTCGTTTT ATCTCATTTT TCTGGCATGC GTTTTTATAT ATAGCACTAG TTTATATTAC AGACCTATAT CTTCCTTTAT ATTGATATGT ATCCTTGCAG CTATTATCGC CTCCCAGATT CTTTATGTTA GAGAGGGAGA CGGAGTGAAC TCTCTATTAT TGCAGATATT CCTGCTATCA ATTCTCATCA GAGTTGGAAT TTTTTATAAT TTTCCAAGTT TGATGGGCTA TGATGCTTAT TTCCATGCCA GTATGTCACG AGCAATTACT GATACCGGAT TTGTTGCTCC TATTGAAACA AGCAGTAAGT ACTTCTACTA CCCTCTTTTT CATGTTTTTG TCTCAATTAT CCAGGTAATG GGTGAAACCG ATATCAAAGA CGCAATATTT TATTCCATAG GGTTTGCCAG TGTTCTCAGT ACAGTAGGCG TTTACCTAGT AGGAAAAAAA ATTGAAGGCA TTCAGATGGG TTTGCTGGCA ACATTATTAA TAAACTTAAA TAATCATAAT ATCGTTGCAG GCATTACAAA TATAACTCCT GGTTCTCTTG TTCTTTGCTA TTTTATATTC ATTATATACG CGATCTTTAG CGAGAAACAG AGCTTGAGAT ATACAGGATT CATTCTGTTA ACTACTATTC TAATGGTTCT GACCCACCAG TTGACAACTT TTGTAGTATT TCTTTCTTTA GTCTCAATTT GTGCAGGCAA ATATCTGCAC AATCGTGTAT ATAAAAGTCT TTTCGTGAAA ATAAACAGTT TTAATTATAT CCTCTTTTTT GTTATTAGTT TACAAACATA CTGGATGTTC ACTTATGTTA ACTCAAATAC CTCGTTTCTT GAAATGGTTC TCAGTCCTCT TATGGATGTC CTTCAAATCG GATCAAGCTA CTCAAGTGAT GAACTTATTA TGGGTTCCGT AAATAATCAG GAAACACTGG AAACGCTCTT ACTCCATATA AGCTATCTTG CTCTACCTTT TTTCGCAATA GGAGGAGTAT TGGCATGGCT TTCTCGCGAA GATATCAAAA AAGTTAATAA GTTTTCTATT GCTTTAGTTG TTATAATCCT GTACGGTCTT GCTTATGGAA TTCCTTTACT TGGAATGAGG AATTTCCTTA CAAGCCGATG GTTCCCACTG ATAGCCGTGT TCCTGGCACT TGTATCCGCC TCATATATGT TGAAATTAGT AAGTCTCTTT AACTCAAAAA AAGCAAGGAT ACCTGTGATG TTCACAATCA TTCTTCTATT TTCGTTTGTA ATGGTTACAA CACCAGGCAT AAATAAAGAC AACCCACTTG TAGCAAAGGA CACAACCGTA AGAAACCAGT TTAAAAGTAT TGAAATCGAG GCCATTAAAA CAGTAACCGA AAAGTGCTCT GGAAATATTC TGATGGATTC CCCCTATGAC AGTTGTCTTT TTTACAGGGA CAGAGCATAT GATTCCAGTA ACGCAACATA TTTTAACATT CAGCATATAC AGACTGGAGA GATTGATGGC AGTCCTACGA TTTTGCTTAG AAAGTCAACT GTTAAAGAAC CTGTCTCTAT CAATGATCCT GAACGCTATG GAGTAAATAT TATCCAGACA TTGCCAGAGG GATTTTTCAA CAGATTCAAC ACACACGATT ATGCCAGAGT ATATGATAAC GACGAGGTAT TTGCTTACAC AAAGGAAGGA AAAACGGCCA GAAACTAA
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Protein sequence | MVTVRGYAGR LTTNLDVILS VMGFGLGLLI ISLYYIIDLN QKDIGIAILS SCLIYFIFRN KFKSEAAISS RENKFKSILG ISFYLIFLAC VFIYSTSLYY RPISSFILIC ILAAIIASQI LYVREGDGVN SLLLQIFLLS ILIRVGIFYN FPSLMGYDAY FHASMSRAIT DTGFVAPIET SSKYFYYPLF HVFVSIIQVM GETDIKDAIF YSIGFASVLS TVGVYLVGKK IEGIQMGLLA TLLINLNNHN IVAGITNITP GSLVLCYFIF IIYAIFSEKQ SLRYTGFILL TTILMVLTHQ LTTFVVFLSL VSICAGKYLH NRVYKSLFVK INSFNYILFF VISLQTYWMF TYVNSNTSFL EMVLSPLMDV LQIGSSYSSD ELIMGSVNNQ ETLETLLLHI SYLALPFFAI GGVLAWLSRE DIKKVNKFSI ALVVIILYGL AYGIPLLGMR NFLTSRWFPL IAVFLALVSA SYMLKLVSLF NSKKARIPVM FTIILLFSFV MVTTPGINKD NPLVAKDTTV RNQFKSIEIE AIKTVTEKCS GNILMDSPYD SCLFYRDRAY DSSNATYFNI QHIQTGEIDG SPTILLRKST VKEPVSINDP ERYGVNIIQT LPEGFFNRFN THDYARVYDN DEVFAYTKEG KTARN
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