| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1065 |
|---|
| Symbol | |
|---|
| ID | 3627474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1305826 |
|---|
| End bp | 1306410 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637699955 |
|---|
| Product | putative regulatory protein |
|---|
| Protein accession | YP_304613 |
|---|
| Protein GI | 73668598 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1584] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAA ACGTAGGAAC TGCTACTGTA ATAGTTGACA AGACTGCAAA TGCTGCCCCT
CTGGGCTTTA CCGGCCTTGG CCTTGCCGCA GTTCTGCTAA GTCTGAGCTA TATAGGGATA
TATCCTGTGG AATCAATGAT CGTATCCATG GCAATATTTC TGGGTGGGTT TGCCCAGGTG
TTTGCAGGAA TTATGTCCTG GAAAAAAGGA GATATTTTTG CAGGGACTGC ATTCTCTGCT
TTCGGTCTGT TCTGGTTCTC ACTGGCCGGA TTGCTTGTTA TGCCTGCAAT CGGCTGGGCT
GAGGCTTCGT CCGGAACTGC TATGGCCGCG TATCTCTTTA TCTGGGGTGT CTATACCTTT
GTTATGCTGA TCGCTACTAT GAGAATCGGA GTCCGTGCCC TCCAGTTTGT ATTTGTTACA
TTATTTTTGT TATTTATGTT GCTTGCTGTT GTAAACGCAA CCGGCAGTAC AGGGTTGCTT
ACAGTAGCTG GCTATGTAGG ACTTGTTATG GGCCTTGGAG CTCTTTATAC AGCTCTTGGC
ATGGTAATGA ATGAAATCCA CGGAAAAACT GTAATCCCAC TCTAA
|
|---|
| Protein sequence | MSENVGTATV IVDKTANAAP LGFTGLGLAA VLLSLSYIGI YPVESMIVSM AIFLGGFAQV
FAGIMSWKKG DIFAGTAFSA FGLFWFSLAG LLVMPAIGWA EASSGTAMAA YLFIWGVYTF
VMLIATMRIG VRALQFVFVT LFLLFMLLAV VNATGSTGLL TVAGYVGLVM GLGALYTALG
MVMNEIHGKT VIPL
|
|---|
| |