| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1053 |
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| Symbol | |
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| ID | 3624515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 1286568 |
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| End bp | 1289417 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637699943 |
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| Product | sodium/potassium-transporting ATPase, alpha subunit |
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| Protein accession | YP_304601 |
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| Protein GI | 73668586 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01106] sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGAAGA ATCTGACTGG CGGTAACAGC AAGATTTGTT CTCCCCAGGG GAACGAACAT
AGTATTCCAC TTTTGGAGTT TCTTCAAAAG TTAAACGTTG ACGAAAATGG ACTGAGTGAG
CAGGAAGCTA CCAGTCGGCT CAAAGAATGT GGAGACAATG TTCTTGAAGA AACAGGGAAA
GAGAGCATAA TAAATAAGTA TCTCAGGCAG TTCCGGAATT TATTCTCTAT CCTGTTAACT
GTGGGATCAA TTCTGTCTTT CGTTGGAGAA TACCTTGATC CAGGGCAGGG AAACCTGTAT
ATAGGAATTG CTCTTGCAGG CGTTGTAATC ATCAATGGGA CCTTTACATT CATACAGGAG
TACCAGGCTG AAAAAACCAT GGAAAGTTTT CGTCAGCTTC TTCCTCCCCA TGCCAGGGTA
CTGAGAGAAG GAAAGGTAAA AGATATTCTG GCATCGGAGC TTGTTGTAGG AGACGTCATC
CTTCTTGAGG AAGGAGATAA GGTTCCTGCC GATGGGCGTT TGGTTGAAAT TAATACCCTG
AAAGTGGACA ACTCGGCTAT TACTGGCGAA TCTGAGCCCC AGCTTCGGTC ACTTGAATGC
ACTCACCCAA ATATGCTGGA GTGCAGGAAC ATGGTTTTTT CAGGGACTCT GATACAGAGT
GGGAATGGAA AAGCTGTTAC CTTCGCCACT GGACAAAATA CTCAGATCGG AAGCCTTGCA
ACACTCACAC AACAAACTTC AGGCGTGGAT ACTCCCATTC GAAGAGAAAT AAATTACTTC
ATAAAAGTCA TATCTACAAT TGCGATTTCC CTGGGAATAG TCTTCTTTAT ACTTGCTTTT
CTTCTTCAAG ATGTTTTTCT TGCAAGTTTG ATCTTTGCGA TTGGAATTAT TGTTGCCAAT
GTGCCTGAAG GGCTTTTGCC TACAGTTACT CTTGCCCTTA GCCTTGCTTC CAAGCGAATG
GCCTCTCGGA ATGCCCTTAT AAAACAGCTT GAGTCCGTAG AAACTCTTGG CTCGACAACG
GTTATCTGTA CGGATAAAAC CGGTACCCTT ACTCAGAATA AGATGGCAGT AAACTCTATC
ATGATCGGTT TTGAATGTCT TGTTATCGAA AACCCTGCCA GCACTAAAAA AACAACCACA
GAGCAGGATA TCATCGAAAG TACAAACAAA GCAGATATGG AAAAACTTAC AGATTCAAGG
ACAGAAGGAT TCTGTGCTCT AAAAAAACCT ATCTGGGACC CTGAAAAATT GCCATCTGTT
TTCATAAGAG TTGCAGGGCT ATGTAATAAT GCAAAACTTC GCGAGTCTGC CCCGGGATAT
ACTGGTGATC CTACCGAAGG GGCACTTCTC GTTTTTGCAA ATGGCCTGGA AGATATAGGA
AAGCTCAAGA ATGATTACCC TAGGCTGGAA GAATTTCCTT TTGATTCGCT TACGAAAAGA
ATGGAAGTTA TCTGCCGTAC TCCTGAAGGA AAACTTGAAG TTTATCTCAA GGGGGCCCCG
GAAGTAGTTG TGAAAATGTG CAGTTCATCC CTAGATTCAA GAGGAATCCG GAAACTGGAT
GAAACTGAGC AACAAAAACT TCTTGACCGG CACCTGGGCC TTGCAAAAAA AGGAGAACGA
ATTATAGCCC TTGCGTACAG GCAGATAGAA GATATAAATG AATATACTGG GGATTTTATC
TTCTTAGGAT TTATAGGAAT TGTAGATCCT CCTCGCCCTG AAGCCAGAGA AGCTATTGCA
AAGTGCCATA CAGCCGGGAT CAAGGTTGTC ATGATCACAG GTGATCACCC GGTCACGGCA
GAATCAATAG CAAAGGACGT GGGGCTTGCA AACTCAGGAA ACCTTGAGAT CATTACCGGA
AATGAGCTGG CAACGTTATC ACGCGCAGAC CTTGCTTCAA GATTAAAAAA TCCGAGCATT
GTTTTTGCCC GCACTTCTCC TGTACAAAAA CTAAAAATCG TACAGCTCTT TCAGGCCGAA
GGGGAAATAG TGACCATGAC AGGAGATGGG GTCAATGATG CTCCTGCAAT CAAGAATGCA
GATATGGGCG TTGCTATGGG CAGTGGCACG GATGTGGCGC GCGAAGCTGC GGATATGGTA
CTTCTTGATG ACAATTTCGC TACGATTGTG AATGCTGTAG AAGAGGGCAG GACGGTTTTC
GATAATATTA AAAAATTCAT CGCATACATT CTTGCCAGCA ATATTCCTGA GATCCTGCCT
TTCATAGCCT TCGTCCTCTT TGCCCTGCCC CTTCCCATGC CTGTACAGCT TATTCTGGCA
ATCGACCTGG GCACGGATAT GCTGCCTGCG ATTGCCCTGG GAAAAGAAAA AGGTGAAGGA
GATATTATGA AAAGACCTCC CAGAGCGAGA GAAGAAAAGC TTTTGACTCC TCCACTACTT
TTCACAGCTT ATGCAGTAAA GGGTCCTGTA GAAGCTATCG CAGGCTTTTT CTGCTATTTT
GCTGTCCTTT TTGAGGGGGG TTGGAGTTTT GGCGAGCAGC TTGCAAACAA CAATCCCCTT
TACATGCAGT CAATAACCGC TTTCTTTTCA GCAGTGATTA TATGCCAGAT TGCTAATGTT
TTTGCTTCCC GAACTCGTTA TCAGTCAGTC TTCTCAATGG GTTTATTTAG TAATCGTACT
GTTCTGGTAG GAATTGCAAG TGAACTCCTA ATTCTGGCAT TTATTATCTG GAATCCATCG
GCAAATCTTA TTTTCAATAC GTCTCCCCTT GACCTCAGAT ATTTGCTAAT TGCAGTTCCC
TTTGCGATTT TATTGCTTGG AATCGATGAG TTAAGAAAAT ATCTGTTGAG AAGGAATGTA
AGCTGGGTAA CCAGATACCT TAAGTGGTAA
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| Protein sequence | MGKNLTGGNS KICSPQGNEH SIPLLEFLQK LNVDENGLSE QEATSRLKEC GDNVLEETGK
ESIINKYLRQ FRNLFSILLT VGSILSFVGE YLDPGQGNLY IGIALAGVVI INGTFTFIQE
YQAEKTMESF RQLLPPHARV LREGKVKDIL ASELVVGDVI LLEEGDKVPA DGRLVEINTL
KVDNSAITGE SEPQLRSLEC THPNMLECRN MVFSGTLIQS GNGKAVTFAT GQNTQIGSLA
TLTQQTSGVD TPIRREINYF IKVISTIAIS LGIVFFILAF LLQDVFLASL IFAIGIIVAN
VPEGLLPTVT LALSLASKRM ASRNALIKQL ESVETLGSTT VICTDKTGTL TQNKMAVNSI
MIGFECLVIE NPASTKKTTT EQDIIESTNK ADMEKLTDSR TEGFCALKKP IWDPEKLPSV
FIRVAGLCNN AKLRESAPGY TGDPTEGALL VFANGLEDIG KLKNDYPRLE EFPFDSLTKR
MEVICRTPEG KLEVYLKGAP EVVVKMCSSS LDSRGIRKLD ETEQQKLLDR HLGLAKKGER
IIALAYRQIE DINEYTGDFI FLGFIGIVDP PRPEAREAIA KCHTAGIKVV MITGDHPVTA
ESIAKDVGLA NSGNLEIITG NELATLSRAD LASRLKNPSI VFARTSPVQK LKIVQLFQAE
GEIVTMTGDG VNDAPAIKNA DMGVAMGSGT DVAREAADMV LLDDNFATIV NAVEEGRTVF
DNIKKFIAYI LASNIPEILP FIAFVLFALP LPMPVQLILA IDLGTDMLPA IALGKEKGEG
DIMKRPPRAR EEKLLTPPLL FTAYAVKGPV EAIAGFFCYF AVLFEGGWSF GEQLANNNPL
YMQSITAFFS AVIICQIANV FASRTRYQSV FSMGLFSNRT VLVGIASELL ILAFIIWNPS
ANLIFNTSPL DLRYLLIAVP FAILLLGIDE LRKYLLRRNV SWVTRYLKW
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