Gene Mbar_A1048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1048 
Symbol 
ID3624510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1279928 
End bp1280599 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content42% 
IMG OID637699938 
Product5-amino-6-(5-phosphoribosylamino) uracil reductase 
Protein accessionYP_304596 
Protein GI73668581 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1985] Pyrimidine reductase, riboflavin biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCAA AAGTAATTAT TCACAACAGT ATAAGTCTCG ACGGTTCTAC TACGGGCTTC 
GAAGCAAATA TTGAAGTTCA CTACAAAATT CTGAGCAGTT ATCAGCCCGA GGCAATGATA
GTAGGCTCGA ACACTGCGAA AACCGGAACC CAGTTCTTCT GCGAAAAAAT TCCGCCTGAA
AATGAATCGG ACTTCAAGAA ACCTGAAATC CAGCCCGACG ATCCCAGGGC ATACTGGCTG
ATTGCGGACT CAAAGGGAAT CCTTGAAGGT TTGATGCATG TGTTCAGACG TTCCGAGTTC
AGCAAAGACG CAATCGTTCT GGTCTCGGAA AAGACTCCTG AAGCTTATAT AAATTACCTC
AAAGAAAGGA ATTATGATTT CATCAGGGCC GGAGCAGACC GTGTAAACAT CAGACAGGCA
CTGGAAATTG CAAATGAAAG ATATGGTTTT GAACTTGTAG TTTCGGACAG CGGGGGAGTG
CTGAACAGTA TATTACTCGA ACAGGGACTT GTCGAAGAAA TTAGTCTGAT TCTCACTCCT
GAAATTGTAG GGAAGAATGG AACAAATCTT TTCAGGACTC TTGAAAAGAG TGGGACTAGA
CTTGAACTTT TAAGAGATGA AATTGTGGAA AAGCAATATG TACATCTGAT GTATCGGGTT
TTGAAAGAAT AA
 
Protein sequence
MIPKVIIHNS ISLDGSTTGF EANIEVHYKI LSSYQPEAMI VGSNTAKTGT QFFCEKIPPE 
NESDFKKPEI QPDDPRAYWL IADSKGILEG LMHVFRRSEF SKDAIVLVSE KTPEAYINYL
KERNYDFIRA GADRVNIRQA LEIANERYGF ELVVSDSGGV LNSILLEQGL VEEISLILTP
EIVGKNGTNL FRTLEKSGTR LELLRDEIVE KQYVHLMYRV LKE