| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1046 |
|---|
| Symbol | |
|---|
| ID | 3624508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 1277614 |
|---|
| End bp | 1278903 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637699936 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_304594 |
|---|
| Protein GI | 73668579 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.75067 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCTT TATTCAAACC CTGGAGAGTG CTTCCAATGA CTAGTTTTTC CGAAAAAACC
TTTATTGTTG CAAAGCACGA ATTCCTGAAA ACAATAAAGC GTAAAGAATT TCTTTTTATG
ACCTTCTTCT TCCCTGTCCT ATTTGCAGGA ATCAGTGTTC TTCCTTTATT GCTTTCAGGC
ATGACCCCAA CTGAAGACCA GAGAGTAGGT TATATAGATA TGACTGGTTC CTTCGAATTT
CCAGAATCAA TAAAGAGCGA AGACTTTTCT CTGGGATCCT CAGAGGCAAA AACCTCAGTT
GTAGAATTTG TAATGTACAG GGAAGTTTCC GATGCAAGGC AGGCCTTACA GGCAGGCCAG
CTTTCGTCCT ACCTCGTAAT TCCTGAAGAC TTTCTTAAAA CCGGAACAAT AGGATTGTAT
GGCCTTGAAA AAGAAGCATC TATGCAAAAT ATTGGGCTGT CCTCCGAACT CTCGAATATC
GTTATTACTT CTCTACTTAA GGATAAAGTG GACGAGCTAA CTCTCAACAG GGTCCGAGAT
CCGGTTAACA TAAAGTTTTA TAATGTAGGA GAGAGCGGAG AGTCTTCTGA GCAGGGTATT
GCTGATGTCT TTGCCAGTTT TGGCCTTCCT TTTATTACAG CTTTTCTCCT CTTCCTCAGC
ATTTTTTCAT CATCTGGCTT TCTGCTTCGC GGTGTTGCCG AAGAAAAAGA AAACAGGATA
ATAGAAATTC TGCTGTCTTC AGCAACTCCT TTTGAAATCC TTACAGGCAA GATCTTTGGC
CTTGGTGCAG TCGGCCTTCT GCAGGTTGTA ATCTGGCTTG CGGCAATAAT GCTCGGGAGC
AGGTACGCCC TTCCTGTACA AATCGAACCT ATTACTCTCT GCCTTGCTCT CATTTATTTT
ATATTTGGCT TCCTCTTTTT TGCCAGCGTG ATGGCAGGAA TTGGGGCTGT CACCAGTTCC
CTTCAGGAGA GCCAGCAGAT TGCAGGAATT TTTACGTTTG TAGCCGTATT TCCCCTCATA
TTCATGCAAA TGATCGTTAC AAACCCAGAC AGCTTATTTT CAGTCTTTCT TTCTCTCTTT
CCCCTTAGTT CGCCTGTAGC CATGCTTGCC AGGATAGGGA CTACATCTGT GCCTCTTTAT
CAGATTCTTG CCAGCATCTT CATTCTGCTT ATTTCGGTTC ATGGAACGAT CCTGCTCTCC
AGCCGGCTTT TCAGAACTTA TCTGCTTATG TACGGAAAAA GACCGAAAGT AAAGGAGATC
TGGAAGAATA TCTGGACAGG ATCTAGATAA
|
|---|
| Protein sequence | MKSLFKPWRV LPMTSFSEKT FIVAKHEFLK TIKRKEFLFM TFFFPVLFAG ISVLPLLLSG
MTPTEDQRVG YIDMTGSFEF PESIKSEDFS LGSSEAKTSV VEFVMYREVS DARQALQAGQ
LSSYLVIPED FLKTGTIGLY GLEKEASMQN IGLSSELSNI VITSLLKDKV DELTLNRVRD
PVNIKFYNVG ESGESSEQGI ADVFASFGLP FITAFLLFLS IFSSSGFLLR GVAEEKENRI
IEILLSSATP FEILTGKIFG LGAVGLLQVV IWLAAIMLGS RYALPVQIEP ITLCLALIYF
IFGFLFFASV MAGIGAVTSS LQESQQIAGI FTFVAVFPLI FMQMIVTNPD SLFSVFLSLF
PLSSPVAMLA RIGTTSVPLY QILASIFILL ISVHGTILLS SRLFRTYLLM YGKRPKVKEI
WKNIWTGSR
|
|---|
| |