Gene Mbar_A1041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1041 
Symbol 
ID3625042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1269220 
End bp1270308 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content47% 
IMG OID637699931 
Producttranslation initiation factor IF-2B subunit alpha 
Protein accessionYP_304589 
Protein GI73668574 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID[TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGCT TGAAAGAAAA GCGGAAATTT TTCCGGCAGA ATCTGACGCT TACATCGGAA 
AGTGATCTAA TGAGGACAAT TGACTGGAAG GAAGAGTCTA ACTCCGTGGT GCTGGTAGAC
CAGACCCTTC TCCCTAAAGA GTACAGGATA ATAGAATGCA AAACCCTGAG TTCTCTCTGC
GAAGCTATAA AATTTCTCCG GGTCAGGGGT GCTCCTGCTC TCGGTGCAGC AGGAGGTTTC
GGGATTGCCC TTGCAGCTTT CCTGAGTGGG GCTAGAGATT TCGAAACAAT AATAAGAGAT
CTTAAGGTTG CGGGAAAAAC CCTTAAATCA ACCCGACCTA CGGCAGTAAA CCTTAGTTGG
GGTGTGGACA GAGTTCTGAA AGCGGTTTCA GATGCCTTTG ATGTTCAGAG AGTCCGGGAA
ATTGCCCTTC AGGAAGCCAG GGATATTGCG GAAGAAGATG TAACTACTAA TAAATTGATA
GGTGAATCCG GGACAAAACT CCTGAAGGAT GGAGATACCA TACTCACACA CTGCAATGCA
GGCAGGCTAG CCTGTGTTGA CTGGGGTACA GCTCTTGGGG TTGTGCGCTC GGCTATTGCT
GAGGGCAAAG AGATAAAGGT TATTGCCTGT GAGACCAGGC CCCTGAACCA GGGAAGCAGG
ATTACTGCAT GGGAGCTGAT GCAGGACAAG ATTCCAGTAA CCCTTATTTC GGATTCTATG
GCTGGATGGG TAATGCAGCA GGGATTTGTA GACAGCGTGC TTGTAGGGGC TGACAGGATT
ACCCAGGATG TTATTTTCAA CAAAATAGGT ACTTATTCCC TCTCCATTCT TGCAAAAGAG
CACAATATTC CATTTTATGT AGCAGCTCCT GCCTCTACTT TCGATTTCAA TGGCTGGGAA
GGCAGTGTAA AGATAGAGAT GCGAGACCCG GATGAGTTGC GCTTTTTTGG ATCCGAGCAA
CTTGCCCCAA AAGACGTGGA AGTTTACAAC CCTGCCTTTG ACGCAACTCC CATGGAAAAC
GTGACTGCAG TAGTTACTGA GAAAGGAGTA TTTTACCCGC CATTCCTCTT GGACGAAGTA
CTTGTTTGA
 
Protein sequence
MGSLKEKRKF FRQNLTLTSE SDLMRTIDWK EESNSVVLVD QTLLPKEYRI IECKTLSSLC 
EAIKFLRVRG APALGAAGGF GIALAAFLSG ARDFETIIRD LKVAGKTLKS TRPTAVNLSW
GVDRVLKAVS DAFDVQRVRE IALQEARDIA EEDVTTNKLI GESGTKLLKD GDTILTHCNA
GRLACVDWGT ALGVVRSAIA EGKEIKVIAC ETRPLNQGSR ITAWELMQDK IPVTLISDSM
AGWVMQQGFV DSVLVGADRI TQDVIFNKIG TYSLSILAKE HNIPFYVAAP ASTFDFNGWE
GSVKIEMRDP DELRFFGSEQ LAPKDVEVYN PAFDATPMEN VTAVVTEKGV FYPPFLLDEV
LV