Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1041 |
Symbol | |
ID | 3625042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1269220 |
End bp | 1270308 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637699931 |
Product | translation initiation factor IF-2B subunit alpha |
Protein accession | YP_304589 |
Protein GI | 73668574 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family |
TIGRFAM ID | [TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase [TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAAGCT TGAAAGAAAA GCGGAAATTT TTCCGGCAGA ATCTGACGCT TACATCGGAA AGTGATCTAA TGAGGACAAT TGACTGGAAG GAAGAGTCTA ACTCCGTGGT GCTGGTAGAC CAGACCCTTC TCCCTAAAGA GTACAGGATA ATAGAATGCA AAACCCTGAG TTCTCTCTGC GAAGCTATAA AATTTCTCCG GGTCAGGGGT GCTCCTGCTC TCGGTGCAGC AGGAGGTTTC GGGATTGCCC TTGCAGCTTT CCTGAGTGGG GCTAGAGATT TCGAAACAAT AATAAGAGAT CTTAAGGTTG CGGGAAAAAC CCTTAAATCA ACCCGACCTA CGGCAGTAAA CCTTAGTTGG GGTGTGGACA GAGTTCTGAA AGCGGTTTCA GATGCCTTTG ATGTTCAGAG AGTCCGGGAA ATTGCCCTTC AGGAAGCCAG GGATATTGCG GAAGAAGATG TAACTACTAA TAAATTGATA GGTGAATCCG GGACAAAACT CCTGAAGGAT GGAGATACCA TACTCACACA CTGCAATGCA GGCAGGCTAG CCTGTGTTGA CTGGGGTACA GCTCTTGGGG TTGTGCGCTC GGCTATTGCT GAGGGCAAAG AGATAAAGGT TATTGCCTGT GAGACCAGGC CCCTGAACCA GGGAAGCAGG ATTACTGCAT GGGAGCTGAT GCAGGACAAG ATTCCAGTAA CCCTTATTTC GGATTCTATG GCTGGATGGG TAATGCAGCA GGGATTTGTA GACAGCGTGC TTGTAGGGGC TGACAGGATT ACCCAGGATG TTATTTTCAA CAAAATAGGT ACTTATTCCC TCTCCATTCT TGCAAAAGAG CACAATATTC CATTTTATGT AGCAGCTCCT GCCTCTACTT TCGATTTCAA TGGCTGGGAA GGCAGTGTAA AGATAGAGAT GCGAGACCCG GATGAGTTGC GCTTTTTTGG ATCCGAGCAA CTTGCCCCAA AAGACGTGGA AGTTTACAAC CCTGCCTTTG ACGCAACTCC CATGGAAAAC GTGACTGCAG TAGTTACTGA GAAAGGAGTA TTTTACCCGC CATTCCTCTT GGACGAAGTA CTTGTTTGA
|
Protein sequence | MGSLKEKRKF FRQNLTLTSE SDLMRTIDWK EESNSVVLVD QTLLPKEYRI IECKTLSSLC EAIKFLRVRG APALGAAGGF GIALAAFLSG ARDFETIIRD LKVAGKTLKS TRPTAVNLSW GVDRVLKAVS DAFDVQRVRE IALQEARDIA EEDVTTNKLI GESGTKLLKD GDTILTHCNA GRLACVDWGT ALGVVRSAIA EGKEIKVIAC ETRPLNQGSR ITAWELMQDK IPVTLISDSM AGWVMQQGFV DSVLVGADRI TQDVIFNKIG TYSLSILAKE HNIPFYVAAP ASTFDFNGWE GSVKIEMRDP DELRFFGSEQ LAPKDVEVYN PAFDATPMEN VTAVVTEKGV FYPPFLLDEV LV
|
| |