Gene Mbar_A1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1015 
Symbol 
ID3625594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1240418 
End bp1241851 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content36% 
IMG OID637699904 
Producthypothetical protein 
Protein accessionYP_304563 
Protein GI73668548 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGGC TTGTGGGTGA GGTTAACGAG AATATTCAGG TAAAAAACAG CCAGGAAAAA 
TATGATGTAA ATCTGGGTAT TCGTGAGTGG AAACGCTATC CAGAGTATAA GGATTCAGGG
GTGGAATGGA TTGGGGAAAT TCCGAAAGAG TGGGAAGTAA AAAAAATAAA GCATACAACC
TATGTGAAAG GGAGAATTGG CTGGCAAGGC TTAAAATCTG ATGAATTCAT AGATGAAGGA
CCTTTTTTAG TTACTGGAAC TGATTTTATT AATGGATCTG TTAATTGGGG ATCTTGTTAT
CACGTAAACG AAGAAAGATA TAATGAAGAT CCTTATATAC AGTTAAAAGA AAAAGATCTA
TTAATTACAA AAGATGGAAC TATAGGAAAG GTAGCTCTAG TAACAAGATT AAAAACAAAA
GCTACTTTGA ACAGCGGTAT ATTTTTAACA AGACCTCTTA CCGGAGAGTA TTATACCAAT
TTCATGTACT GGCTACTGAA TTCGGAAGTT TTTGAAACTT TTTTTAATTA CATTTCAAAT
GGATCTACAA TTCAACATCT TTACCAAAAC GTATTTGTTA TCTTTTCATT CCCACTACCC
TCACTTTCAG AACAACAATC TATTGTGAGC TTTCTAGACC GCGAAACCTC CAAAATCGAG
ACCTTGATCG AAAAAAAGCA ACGCTTAATT GAACTTTTAG AAGAAAAGCG CTCTGCCCTG
ATAAGCCATG CAGTAACAAA AGGGCTTGAT CCTTATGCGA AAAAGAAGAA TTCTGGTGTG
GAATGGGTTG GGGAAATTCC TGAAGGTTGG TTTTTAAGTA AATTAAAATA TCTCACATCA
AAAATTGGAA GCGGAAAAAC TCCTCGGGGC GGTTCCGAAA TTTACTGTGA CTCAGGAATT
CTTTTTTTGA GAAGCCAGAA CGTACATTTT GATGGTTTAA GATTGGATGA TGTTGTCTAT
ATTGATGAAA GTATAGATTC GGAAATGTCT TCTACACGTG TATTACCTGA TGATGTTCTT
TTAAACATAA CTGGGGCCTC AATTGGAAGA TCGAGCATTG TTCCAAAAGA TTTTCCTCAA
GCAAATGTCA ATCAACACGT GTGTATTATT CGTCCCTTGA AAAAGAAAAT TGATTCACGA
TTATTACACT ACGAACTTAG CTCAAACGGG GTACAAGCCC TGATTTTTTC AAATGAAAAT
GGAACATCTA GGGAAGGATT AACATTTTCA CAGATATCTA ATTTTGTTAT AGCAATTCCA
AATAATCTGG ATGAACAAAG ACACATTGCC AATTTCCTCG ACCACAAAAC TGAAAAAATT
GATACATTTA TAAATAAGAT AAGCGCGCAG ATAGAAAAAC TGAAAGAGTA CCGCACTGCT
CTGATCTCTG CGGCTGTCAC TGGAAAAATT GATGTGCGGG AGGAAGTTGC ATAA
 
Protein sequence
MSGLVGEVNE NIQVKNSQEK YDVNLGIREW KRYPEYKDSG VEWIGEIPKE WEVKKIKHTT 
YVKGRIGWQG LKSDEFIDEG PFLVTGTDFI NGSVNWGSCY HVNEERYNED PYIQLKEKDL
LITKDGTIGK VALVTRLKTK ATLNSGIFLT RPLTGEYYTN FMYWLLNSEV FETFFNYISN
GSTIQHLYQN VFVIFSFPLP SLSEQQSIVS FLDRETSKIE TLIEKKQRLI ELLEEKRSAL
ISHAVTKGLD PYAKKKNSGV EWVGEIPEGW FLSKLKYLTS KIGSGKTPRG GSEIYCDSGI
LFLRSQNVHF DGLRLDDVVY IDESIDSEMS STRVLPDDVL LNITGASIGR SSIVPKDFPQ
ANVNQHVCII RPLKKKIDSR LLHYELSSNG VQALIFSNEN GTSREGLTFS QISNFVIAIP
NNLDEQRHIA NFLDHKTEKI DTFINKISAQ IEKLKEYRTA LISAAVTGKI DVREEVA