| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1003 |
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| Symbol | |
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| ID | 3626886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 1224416 |
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| End bp | 1225387 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637699892 |
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| Product | hypothetical protein |
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| Protein accession | YP_304551 |
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| Protein GI | 73668536 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTA ATAAATTAAA AATCGGCAAA ACAGAAACAC CTGGGAACCT TCTTCTTGCG
CCTATGGCAG ACGTGACAAA TCTGGCTTTC AGGCTGCTCT GCAGGCAGAA TGGAGCTGAC
CTTACATATA CTGAGATGAT CAGCGCAGAT GCCTTGCTCA ACGAAAACCG AAAATCGCTT
CTCAAAGGAC TGTCTTCCCC TGAAGACCGA CCTTTTGGAG TTCAGCTTGT AGGAAGTTCT
CCTGAGAAAC TGAGGGAAGC TGCGCTCTTT ATTGAAGATG AGTACAGACC TGAACTCATC
GATGTAAATA TGGGCTGCCC TGCAAAGCGT ATTACTGGAA CAGGGTGCGG CTCGGCTCTT
CTCAACTCCA AGAAACTCAT ATATGAAATT ATCTCCGATC TGACCGATGT TCTGAAGACT
CCTGTAACTG CAAAGATCCG CATTCTGAAG AGGGATGAGA AAACCCTTGA GATTGCACGC
CTGATCGAAG AGGCTGGAGC TTCTGCCCTG ACCATACATG GCAGGAGGGC AGAGCAAATG
TACTCCGGAA GTTCAGACCT TACAGTGATA AGAGCCGTTA AACAGGAACT TTCCATTCCA
GTAATTGCAA ACGGGGATAT AAGGAACGAA GAGTCTGCTG AAGCTGCCCT TGATTTTACC
GAATGTGACG GGCTTATGAT CGGACGCGCA GCAATGGGAA ATCCCTTTAT CTTCAAAAGG
ATAAGGCATT ACCTAGAAAC CGGGGAAAGG CTGGAATTTG ACAGGCAAGT TCGTCAATTA
GAGGACTTTG AGAATTATAT CGCTTTACTT GAAGAATATG ATCTCCACGC GTCTACAAAT
ATAAGAATGC ATGCTCACTG GTTTACAAAA GGGTTGCGCG GCTCGCGGCA GATTAGGGAA
AAGATTAATA ATCTGAAAGA TGGAAAGGCG ATTGTTGAGT TAATAAAAGA TTTCCATACG
GAGAATTATT AA
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| Protein sequence | MKLNKLKIGK TETPGNLLLA PMADVTNLAF RLLCRQNGAD LTYTEMISAD ALLNENRKSL
LKGLSSPEDR PFGVQLVGSS PEKLREAALF IEDEYRPELI DVNMGCPAKR ITGTGCGSAL
LNSKKLIYEI ISDLTDVLKT PVTAKIRILK RDEKTLEIAR LIEEAGASAL TIHGRRAEQM
YSGSSDLTVI RAVKQELSIP VIANGDIRNE ESAEAALDFT ECDGLMIGRA AMGNPFIFKR
IRHYLETGER LEFDRQVRQL EDFENYIALL EEYDLHASTN IRMHAHWFTK GLRGSRQIRE
KINNLKDGKA IVELIKDFHT ENY
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