Gene Mbar_A0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0998 
Symbol 
ID3626881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1218450 
End bp1219571 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content40% 
IMG OID637699887 
Productiron ABC transporter, solute-binding protein 
Protein accessionYP_304546 
Protein GI73668531 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATT CATCAACCCC CCAAAATTAC CAAACAAGTG AAGAAACAGA AACTAGAAAC 
ATTACTGAAA CTAGAAACAT TACCGATGCT CTTGGCAGAA ACGTGGAAAT TCCAAAATCT
GTAGATTATG TAATTTGCTC AGGAGTGTCT TCTCTTAGAT TTTTGACATA CCTTGAAGCA
CAGGACAAGA TTGTAGGTGT TGAAAGAAGC GAAACAACTA ATTCAGCATC TAATGCCAAG
CCATATTCCC TTGCAAATCC TCAGTTTAGC ACAGATTATC CTGTATTTGG AGAAACCAGA
GGACAGGATG ATCCTGAAAA AATACTTTAC CTCGACCCTT TACCTCAAGT TATAATTAAA
ACAGACTCCA CAACAGGCTA TGCTCCTGCG GAACTTCAAA AGAAAACAGG TATTCCGGTA
GTTGTTGTGA ATACGGGAGA TTTGACAGAT AATAGAGAAG ACTTGGATAA GAGCCTCAGG
ATAATTGGAC AGGTTGTTGG CAAAGAGGAG CGAGCAGAAG AAGTTATTGC TTTCTTTGAC
GAAAAAATAG CAGACCTTGA GGAGCGCACT GTCAACGTAT CGAAAGAAGA CAAGCCCACA
TGTTACATAG GAGGCATAGG ACGTGCAGGA GGACCACAAG GATTTCAATC AACTGAATTA
ACATATCCTC CATTCCTCTT TACCAATGTA ATAAATGTTG CTTATGGCGA TAGAGGCATC
ATCAACGCTG CAGATGTTTC AAAAGAAAAG ATCATCGAAT GGGATCCTGA TATCATATTT
CTGGATCTGA ATACAATCGA ATGCGGAGGA GAAAGAAGCG GACTTAACCT GCTACAGAAC
GATACGTCAT ATAGACAGCT AAAGGCAGTT CAGTCAGGAA ATGTATATGG TGTATTGCCT
TTCAACCAGT ACGCAACAAA CTTTGGCTCA GTGCTGGCGG ATTCTTATTT TGTAGGAAAG
ATGATTTATC CAGACAGATT CCGAGATGTA GATCTTGAGA ATAAGACTAT TGAGATATAC
ACATTCCTTG TATGCAAAGG GAATAAAGAG CTCGGTAAGG AGATATATGA CAAAATAATT
AATGTCTATG GAGTATCGGC ATTCACAAAA CTGGAAATCT GA
 
Protein sequence
MEDSSTPQNY QTSEETETRN ITETRNITDA LGRNVEIPKS VDYVICSGVS SLRFLTYLEA 
QDKIVGVERS ETTNSASNAK PYSLANPQFS TDYPVFGETR GQDDPEKILY LDPLPQVIIK
TDSTTGYAPA ELQKKTGIPV VVVNTGDLTD NREDLDKSLR IIGQVVGKEE RAEEVIAFFD
EKIADLEERT VNVSKEDKPT CYIGGIGRAG GPQGFQSTEL TYPPFLFTNV INVAYGDRGI
INAADVSKEK IIEWDPDIIF LDLNTIECGG ERSGLNLLQN DTSYRQLKAV QSGNVYGVLP
FNQYATNFGS VLADSYFVGK MIYPDRFRDV DLENKTIEIY TFLVCKGNKE LGKEIYDKII
NVYGVSAFTK LEI