Gene Mbar_A0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0978 
Symbol 
ID3625750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1193106 
End bp1194200 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content44% 
IMG OID637699871 
Producthypothetical protein 
Protein accessionYP_304530 
Protein GI73668515 
COG category[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG1994] Zn-dependent proteases
[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGT CATTAAAAAT CGGAAGTGTT ATGGGTATAC CTATCAGGCT GCACATAACT 
TTTCTTCTCA TATTACCCAT ATTTGCTTAT GTGTTTGCGA TCAACCCGCA GCCTTTCGGT
TTTGAGGGAG TTGAGCCGTC TATCACAAGA TATTCTCTTT CAGTCCTGAC CGCCATCCTG
CTTTTTGCTT CGATCCTTGT ACACGAACTT GCACATTCAT ATCTGGCAAT GCGTTACGGG
GTCAAAATTG AGAATATCAC CCTCTTCCTT TTTGGAGGAG TATCGGCTAT GGAAAAGATA
CCCAGAAAAC CTGAACAGGA AGCAAAAATG GCTTCTGCAG GACCCCTTAC AAGCCTTGTA
ATAGGCTTGG TCTGTCTTTT AATATACGGA AATTTTATTT CCCCTAGCCC TGTGCTTTCT
CAAAATCCGG TATACCTTGT TATCTGGATT CTTGGGATTA TGAACCTTAT ACTCGGGATC
TTCAACCTGC TGCCTGCTTT TCCAATGGAT GGGGGTAGAG TACTTCGCTC TTTCTACGCG
AGAAGAATGT CTTATGTGAA AGCTACCCAG AGTGCAGCAG CCGTGGGGAA ATTTTTTGCC
GTTCTTATGG CAATTTTCGG AATTCTTATA GGCAATCCCT GGTTCCCTTT GATTGCGCTC
TTTATTTACG TCGGCGCGTC TGAAGAGGAA CGCTCTACTC GGGCTGAGGT AACCCTCGAA
AATATTAGGA TCAGGGATAT TATGACCAGG AATGTAGTTT CAGTAAGTCC TTCCATGAGT
GTGGACGACC TGGTTAAATT CATGTTTGAG AAGAAACATA TGGGCTATCC TGTGATGGAA
GGAGACTTCC TGAAAGGAAT TGTAACGTTT ACAGACATCC AGCGTATTCC TTCTGTTGAC
CGCCCGGCGG CCAAGGTCTC GGATATTATG ACCAGAGATG TTATCTCAGT ATCTCCGGAT
GCGCAAGCCA GTGATGTCCT GAAACTTGTA TCATCTAAAA ATATCGGAAG AGTTCTAGTT
ATTGATAATG GATCGATCGT AGGAATACTC TCAAGAACGG ATCTTGTACG GACTCTGAAA
CTGAGGTCAG AGTAA
 
Protein sequence
MKSSLKIGSV MGIPIRLHIT FLLILPIFAY VFAINPQPFG FEGVEPSITR YSLSVLTAIL 
LFASILVHEL AHSYLAMRYG VKIENITLFL FGGVSAMEKI PRKPEQEAKM ASAGPLTSLV
IGLVCLLIYG NFISPSPVLS QNPVYLVIWI LGIMNLILGI FNLLPAFPMD GGRVLRSFYA
RRMSYVKATQ SAAAVGKFFA VLMAIFGILI GNPWFPLIAL FIYVGASEEE RSTRAEVTLE
NIRIRDIMTR NVVSVSPSMS VDDLVKFMFE KKHMGYPVME GDFLKGIVTF TDIQRIPSVD
RPAAKVSDIM TRDVISVSPD AQASDVLKLV SSKNIGRVLV IDNGSIVGIL SRTDLVRTLK
LRSE