Gene Mbar_A0973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0973 
Symbol 
ID3625745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1185147 
End bp1185920 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content43% 
IMG OID637699866 
Producthypothetical protein 
Protein accessionYP_304525 
Protein GI73668510 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTGC ATAGAATCAG CTATTCTTCG CGTGCAGTCG TTGAAGACCC TTTCAAATGG 
GCTTACACGC TCGAAGACCA TGGGTATACC GGTTGGGAAA TCGTACAGGA AGGTTCTCAG
TGCCTGAACA GCAAGAACAT TCAGAATTTG AAAAATATCA GTGAAACCAC AGGCCTTGAA
TTAACTCTGC ATCTGCCTTT CTCGGATATG AATCTGGCAG GCCTGAATGA CTCAATCAGG
GCAGAAGTCA TCAGGCAGAT GAAACACTAC CTGACTCTTG CCTCTAATTA TGTCAATCTC
GCTGTAGTAC ACCCTGGTTA CCTTTCCCCT TATGGCGTGC AGGTTCCGCA GGAAGCTTAT
TTTACCAATC TTGCTTCTCT CCAAGAAATC TGTGACTTTG CTGCGGATTT CGGAATCCTT
GTTGCTGTCG AAAATATGCC CGACATGCCG AAAATCTTCG GAAAATATCC TGACGAGATG
CTTGAGATGC TTGAATCTAT TGGAAGCCAT AATGTGGGTT TTACTTTCGA TGTAGGACAC
GCAAACACTG TAGGGCTTAT TGACGACTTT TTGGACCTTC TTAAAGATAA TATCTCTCAT
GTGCATATCC ATGACAACAT GGGTAAAAAA GATGAACACC TACCCCTTGG AAAAGGCACA
ATAGACTGGA TACGAGTTAT GGAAAAACTT TCGGATTATA AAGGAATTTT CGTTACCGAG
ATGAGTTCTG TGGAAGAAGG AATTGAGAGC CTTGATTTTT TAAGAAATCT GTAA
 
Protein sequence
MQLHRISYSS RAVVEDPFKW AYTLEDHGYT GWEIVQEGSQ CLNSKNIQNL KNISETTGLE 
LTLHLPFSDM NLAGLNDSIR AEVIRQMKHY LTLASNYVNL AVVHPGYLSP YGVQVPQEAY
FTNLASLQEI CDFAADFGIL VAVENMPDMP KIFGKYPDEM LEMLESIGSH NVGFTFDVGH
ANTVGLIDDF LDLLKDNISH VHIHDNMGKK DEHLPLGKGT IDWIRVMEKL SDYKGIFVTE
MSSVEEGIES LDFLRNL