| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0956 |
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| Symbol | |
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| ID | 3626452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 1162003 |
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| End bp | 1163883 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637699849 |
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| Product | archaeosine tRNA-ribosyltransferase |
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| Protein accession | YP_304508 |
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| Protein GI | 73668493 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1549] Queuine tRNA-ribosyltransferases, contain PUA domain |
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| TIGRFAM ID | [TIGR00449] tRNA-guanine transglycosylases, various specificities
[TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGGT ACTTTGAGAT AGAACAAAGA GACGGAGCAG CAAGGATAGG AAAACTTCTG
CTGTCTCCCG AGCTTCATAC GCCCTGCATT TTGAATGCGA CAGAACTTGG AAAGCTTGAA
AACCCCGGCC CTGTTGTTGA CGCGGGAAGT TTCTGGGATG TAAAATCCGA TGCAGAGCTC
GAAGCACGCG TAAAGCAAAT CCGGGAAAAA GCAGGAAAAG GAACTCTTAT AATCCTGCCG
CATCAAACTT ATCCGCCTGC CATTCCAGCT GAGTCCCTCG GGAACGTCCA AAAATTTACT
GCTTTTAAAG GCGAAAACGT TGAAGATGCA GGCCCAACAG GTTCTCTCCT TAGAATAGGA
GGAAAGCCTG AGAAAACCGA CCTGTATGTA ATGGAAGGGG CAGGTACCCT GGAAAACAAT
GCACGAAGAT TTCTCGAGAC CGTAATAGAA TTTAAAAACC AGATTCCCCC TGATACAGCT
CTTTATGCCC CAAACCTCGC GCTTCCTGAA AATATAGCTA TGCTAATCTA TCTTGGAGTT
GATGTTCTGG ACGATACCAG AGCAGAAATT GCAGCTTATT CTGATATCTA CCTGACAGCA
ACAAGCAGCT TTTATCTTGA CTCCCTGACA GAGTTTCCCT GCAGGTGCAG GGCATGCGCT
GAAAGTACGC CCGCAGAGCT CAGGAAGCTT CCGAAGATCG AGAGGGCAAA ATTCCTTTCA
GCTCACAATA AGAATGCTCT CGAAGCCGAA CTTTCCCTTG TGCGGGAAAG GATAAGGGCA
GGAACATTGA GAGAATATGT TGAGGGCCAG TGCAGAGTAA GACCCTGGCT CACAGCCCTG
TTAAGACTTG GAGATTTTGA GTATTCCTAC CTTGAAGAAA GAGTTCCTGC TTTCCGGCAA
AACCAGTTGC TTGCAGATAC CTCAGAGGCT CTATCTCGAG TCGAAGTGGT GAGGTTTGCA
CGACGTATAC AGGAAAGGTA TACACCTCCA GACCTTGAGG TCCTCGTACT TTTGCCATGC
GCGGCCAGAA AACCTTACTC AACCTCCCAA TCCCATCAGA AATTTATTCT GGCCCTAGGA
AAATACCGGA AATTCGTCCA TGAAGTGATT TTAACCTCAC CTCTTGGAAT AGTACCCAGA
GAACTGGAAT TAACATATCC AGCAGCCCAT TATGACACTG CAGTTACAGG ACACTGGGAC
GAAGAGGAGA AAAACTGGGT TTCCGGCTGC CTCGAAGCTT ATCTCTCAAA ATACAGATAC
AAAGCCATAG TTGCCCATGT AGAAGGGGCA TACAGGGAAA TCTGTGAAAG AGCGGCAGGC
AATCTCGGGA TTGAAATAAC CTATACTGCT AAAGGAAGTC TTGTGTCTAC GGAGGCTCTC
TCAAACCTCA GGAGTACCGT TGAATCTATC TGTTCATCCG AAAACTTCAG CAGGAAAAGC
CTGAACGCGG AAGAAAACAA GAAGAATTTC GTGAGAGCTA TTGCAGAATA TCAGTTCGGA
GAAGGTGCTG CATTTCTTTT CTCTGAAGAA ATCGGAAAGC TTGTGGTCAA AGGCCGATTC
CCCAAGTATC AGCTCTTTTC CGGAAAAAAA CAACTTGCAA CCCTGGTTCC ACAATACGGA
ATGCTTGCTC TTTCTCTCGA AGGAGCCGAA CTCATGCTAA AAAATAAGAA ATACCTGGTA
AAGATTGATG ATTTTCTCCC ACGCGGTTCA ATCCTTGCCC CAGGAGTTAT TGAGGCTGAT
ACGGGAATAA GGCCTAATGA TGAGGTAATT GTGCTCGGGA AAAAAGCGCT CTGCGTAGGG
CGAGCTATGA TGAGCGGAGA GGAAATGGTA AAGTCTAGTA GAGGAGTTGC AGTGGATGTC
AGGCATATCA AGAAACTCTG A
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| Protein sequence | MTRYFEIEQR DGAARIGKLL LSPELHTPCI LNATELGKLE NPGPVVDAGS FWDVKSDAEL
EARVKQIREK AGKGTLIILP HQTYPPAIPA ESLGNVQKFT AFKGENVEDA GPTGSLLRIG
GKPEKTDLYV MEGAGTLENN ARRFLETVIE FKNQIPPDTA LYAPNLALPE NIAMLIYLGV
DVLDDTRAEI AAYSDIYLTA TSSFYLDSLT EFPCRCRACA ESTPAELRKL PKIERAKFLS
AHNKNALEAE LSLVRERIRA GTLREYVEGQ CRVRPWLTAL LRLGDFEYSY LEERVPAFRQ
NQLLADTSEA LSRVEVVRFA RRIQERYTPP DLEVLVLLPC AARKPYSTSQ SHQKFILALG
KYRKFVHEVI LTSPLGIVPR ELELTYPAAH YDTAVTGHWD EEEKNWVSGC LEAYLSKYRY
KAIVAHVEGA YREICERAAG NLGIEITYTA KGSLVSTEAL SNLRSTVESI CSSENFSRKS
LNAEENKKNF VRAIAEYQFG EGAAFLFSEE IGKLVVKGRF PKYQLFSGKK QLATLVPQYG
MLALSLEGAE LMLKNKKYLV KIDDFLPRGS ILAPGVIEAD TGIRPNDEVI VLGKKALCVG
RAMMSGEEMV KSSRGVAVDV RHIKKL
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