| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0951 |
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| Symbol | |
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| ID | 3626447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 1156427 |
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| End bp | 1157797 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637699844 |
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| Product | (S)-2-hydroxy-acid dehydrogenase |
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| Protein accession | YP_304503 |
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| Protein GI | 73668488 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATAA CTGCAGAACT TCAAAAAATC GTTGGTGGGC GACTCTCAGT CTCGCCTTCG
GAACTTTATT GTTATTCTTC TGACGCATCC CAGGTCAAGG GAATGCCTGA TTACGTGGTA
CGCCCGAAAA GCACAGACGA AGTAAGCCGG ATTGTCAGGC TTGCCTATGA GAACGAGATC
CCTGTGACTG CAAGGGGAGC AGGCACAGGA CTTGCAGGTG GTGCAGTCCC TGTTAAAGGG
GGCATTGTGC TGGATATGTC GGGCATGAAT AGGATTCTTG AAATCGATAT TAATAATATT
CAGGTCCAGG TAGAACCCGG GATTATTCAG GATGATTTAA ATGAAGCGCT AAAGCCGTAT
GGTTTTTTCT TTCCTCCAAA TCCTGGCAGT TCAGCCATGT GTACTATCGG GGGTATGATA
GCTTACAACG CAAGTGGAAT GCGCTGCGTT AAGTACGGTA CTACCAGACA CTATGTTCGC
GACCTTGAAG TGGTGCTTGC GGACGGGACA GTTATTCATA CCGGTTCAAA GATGCTGAAA
TCCGCAGCAG GATATGACTT GACCCAGCTT ATTGTGGGTT CGGAAGGCAC ACTCGGCATT
GTTACAAAAG CCAGGCTTAA GATTGCCCCT CTCCCTAAAA CTCGAAAACT GGTAATTACT
TCCTTTGAAA ACGCGGAAAT TGCAGGGCAG GCGGTCGTAA AAACCTTCTC ACACGGGGTC
ATTCCCTCAG CCTGCGAGAT TCTGGACAGG GTTTCCCTGC AGGTTCTCAA ACGTTACGAC
CCGAACCTTG TGCTTCCTTC AGAAGGCGAT GTAATTCTTT TCGAGGTTGA CGGCACTGAA
AGCTCGGCAC GTGAAGCTGC AGAACAGATC ATGAAAGTCT GTACTCCCCT GTCTCTCTCT
ATAAGGCTTG CGGAAAGTGA AAAGGAAATG GCAGATATCT GGGCAGCCAG AAAACTCGTA
GGGGCTGCGG TTTCTCGCCT GGACCCAACA AAGAGCCGCA TCTATGTAGG AGAAGATGTG
GGAGTTCCCA TAAAGCGAAT CCCTGAACTG CTAAAACGAG CACAGGAAAT CGCTGAGAAA
TTCAACCTGC CGGCTATGAA ATACGGGCAT ATAGGAGATG GAAACCTGCA CTTTGCACTT
TTCATTGATG TCCTGAATAA AGATGAATGG GATCGCCTAA ACAAAGCTGC GGATCTTATT
CACAGGACAG CGATTGAGCT TGGAGGTACA GTTAGCTCCG AACATGGAAT AGGTGCGGCC
AGGGCTGAAT ACATGAAAGC CCAATGGGGC CCTGCCCTTG AGGTAATGCG TGCGATCAAA
AATGCCCTTG ACCCGAAAGG TATACTGAAT CCGGGCAAAC TGGGGTTGTG A
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| Protein sequence | MDITAELQKI VGGRLSVSPS ELYCYSSDAS QVKGMPDYVV RPKSTDEVSR IVRLAYENEI
PVTARGAGTG LAGGAVPVKG GIVLDMSGMN RILEIDINNI QVQVEPGIIQ DDLNEALKPY
GFFFPPNPGS SAMCTIGGMI AYNASGMRCV KYGTTRHYVR DLEVVLADGT VIHTGSKMLK
SAAGYDLTQL IVGSEGTLGI VTKARLKIAP LPKTRKLVIT SFENAEIAGQ AVVKTFSHGV
IPSACEILDR VSLQVLKRYD PNLVLPSEGD VILFEVDGTE SSAREAAEQI MKVCTPLSLS
IRLAESEKEM ADIWAARKLV GAAVSRLDPT KSRIYVGEDV GVPIKRIPEL LKRAQEIAEK
FNLPAMKYGH IGDGNLHFAL FIDVLNKDEW DRLNKAADLI HRTAIELGGT VSSEHGIGAA
RAEYMKAQWG PALEVMRAIK NALDPKGILN PGKLGL
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