| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0926 |
|---|
| Symbol | |
|---|
| ID | 3627306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 1120563 |
|---|
| End bp | 1121357 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637699815 |
|---|
| Product | oligopeptide ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_304479 |
|---|
| Protein GI | 73668464 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase
[COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.161343 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAAA ATGAACTTGT CAGAGTTATC AATGTTACAA AGGTATTCAA GAGTAAAAGA
TTATTTAAGG GCAGTTCATT AGTCACGGCC CTTGATGGAG TATCTCTTGA TGTCGAAAGG
AATAAGATTC TTGGAATCAT CGGAGAAAGC GGCAGCGGTA AAACCACTCT GGCTAAATTA
ATACTAGGTA TTCTGAAACC AACATCAGGA GTTATATCTT TCACAGATAT TACAGATGTG
AATAGTGAAG TAAGGAAACC GACAGTACAG GTAATTTTCC AGGATCCTTA TGACTCTTTG
AGCCATATGA TGACCATCGA AGAAATTGTA TCTGAACCGT ATCTAATAAA GCATAAAAGC
AGGTGTACTC CTGATAAAGT ACGTAGTGTT CTTGAATCCG TAGGTTTGAC ACCTGCTGAA
GAGTACCTTA ATAAGTATCC TTATTCTCTT AGTGGAGGGC AGCGTCAGCG TGTAGCCATT
GCCAGGGCCA TAATTACTAA CCCTGACATA ATAATAGCTG ATGAACCCAT TTCGATGCTT
GATGCTTCCA TTGGTGTCGA TATTCTTAAT CTTATACTTG ATATGAATGA AAACCTTGGG
ATAACATTCA TTTTTATCAC TCATGACATC ACTGCTGCTG CTTATATATG CCACAATATT
GCTGTGATGC ACTCTGGAAA GATAGTAGAA TACGGTTCTC GAAATCAAGT GTTAATACAA
TCCCAGAACG CCTACACAAA TTCGTTACTC TTTGCAGCAG GAGCAAATCT GATATCATCA
GAAACAAAAA AGTAA
|
|---|
| Protein sequence | MGKNELVRVI NVTKVFKSKR LFKGSSLVTA LDGVSLDVER NKILGIIGES GSGKTTLAKL
ILGILKPTSG VISFTDITDV NSEVRKPTVQ VIFQDPYDSL SHMMTIEEIV SEPYLIKHKS
RCTPDKVRSV LESVGLTPAE EYLNKYPYSL SGGQRQRVAI ARAIITNPDI IIADEPISML
DASIGVDILN LILDMNENLG ITFIFITHDI TAAAYICHNI AVMHSGKIVE YGSRNQVLIQ
SQNAYTNSLL FAAGANLISS ETKK
|
|---|
| |