| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0923 |
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| Symbol | |
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| ID | 3627303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 1116454 |
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| End bp | 1117296 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637699812 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_304476 |
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| Protein GI | 73668461 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAG TTTTTGGCGT ATTTGGAGAC CCTATAGCTC ATTCCCTTTC TCCTGCAATG
CATAATGCAG CTTTTTCAGC CCTTGGAATG GACTGTATCT ATCACGCTTT CAGGGTGAAA
CCCGAAAAAC TGGAAAAAGC AATTCTTGGG GCTGAAGCTA TGGGGTTCGG AGGGTTGAAT
CTGACAGTGC CCTTAAAAGA GACAGCCTTG AAACTTGACT GCATAAAACC GGACCCACTG
GCCGAAAAAA TAGGAGCTGT AAACACTATC GTTTTCGGGG AAACCGGAGA AATAAAAGGG
TACAACACGG ACGGACTAGG AGCAAAGCAG GCACTTCAGA ATTCTGCAGT GGAAATGGAG
GGGTCTAAAA TCGTAGTTAC AGGTGCAGGT GGAGCAGCAA GATCCATTGC TTTTCAGCTT
GCAGCCGATG GCGCTGAAAT CACAATAGTA AACCGTACCG AAGGAAGGGC AATCGAGCTT
GCAAAAGATA TCTCAGCTGC ATCCCTTTCT GGAAACGTAA CTGGGAAAGG GCTCTCCGGA
TTAAAAAACT TGTTGCAGGA TGCCAATATC CTGATCAACA CTACGACTCT TGGAATGCAC
CCTAATGTAG ATACTGCGAT TGCCACAGCA GAAGATCTCC ACCCTGACCT TACTGTTTTT
GATATTGTCT ATAATCCCCT GGAAACCAGG CTCTTAAGAG AAGCAAAAGC TTCAGGCGCA
AAGACTGTGA GTGGAGTCTT AATGCTTGTC TACCAGGGAG CTGAAGCTTT CAAGCTCTGG
ACAGGAATCG AACCTCCAGT CGAACTTATG AAAAAAACGG TTTTGGAGGC TTTGCAGGTT
TGA
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| Protein sequence | MKQVFGVFGD PIAHSLSPAM HNAAFSALGM DCIYHAFRVK PEKLEKAILG AEAMGFGGLN
LTVPLKETAL KLDCIKPDPL AEKIGAVNTI VFGETGEIKG YNTDGLGAKQ ALQNSAVEME
GSKIVVTGAG GAARSIAFQL AADGAEITIV NRTEGRAIEL AKDISAASLS GNVTGKGLSG
LKNLLQDANI LINTTTLGMH PNVDTAIATA EDLHPDLTVF DIVYNPLETR LLREAKASGA
KTVSGVLMLV YQGAEAFKLW TGIEPPVELM KKTVLEALQV
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