| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0896 |
|---|
| Symbol | |
|---|
| ID | 3625941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 1079924 |
|---|
| End bp | 1080439 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637699783 |
|---|
| Product | methyl coenzyme M reductase, subunit C |
|---|
| Protein accession | YP_304450 |
|---|
| Protein GI | 73668435 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4055] Methyl coenzyme M reductase, subunit D |
|---|
| TIGRFAM ID | [TIGR03260] methyl-coenzyme M reductase operon protein D |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGACT CTGCTTCAAA TACGGAAGAT TCTATTCAAA TCGAAATTTT TCCCAGTAGA
ATCCTGTCCC CTGAAACGGC TCAGAAGCTT ATGGGCGAAA TCTACAAGGT GGACGGGGTA
ATCCGCGTCA TGGTGCAGGG CAACAGGCTG CCTGATAGGG TGTCTGCCGG CCCCGGTACT
GGGGAAAAAG TGGAACATCC ACTGAGAAAA CCTATTCAGA TTGGAGATCA GGTTATCGAA
TTGAAGATCT GTGTGGGCAG GATCAGGGTT GAACTTTCAA ACGCCGAAGC TAAAGAACAG
ATCAGGGAAG TTTGCGAAAA ATTGCTCCCA TTCCCCTTTG AATTCAGGGA AGGACATTTC
CTCAGGAAAA AGCCTACTGT AACTGACTAT GCTAAACTTG GTCCTGAAGC AGACCCTCGG
TTGCTTGGCA TGGTAGACCC TAAAGCCAAG ACAGACCAGC TCATCTTTAT CGAGAAACAA
AAGGAACAAG AAGAAGATAA GGACAAAGAT GAGTGA
|
|---|
| Protein sequence | MSDSASNTED SIQIEIFPSR ILSPETAQKL MGEIYKVDGV IRVMVQGNRL PDRVSAGPGT
GEKVEHPLRK PIQIGDQVIE LKICVGRIRV ELSNAEAKEQ IREVCEKLLP FPFEFREGHF
LRKKPTVTDY AKLGPEADPR LLGMVDPKAK TDQLIFIEKQ KEQEEDKDKD E
|
|---|
| |