| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0886 |
|---|
| Symbol | |
|---|
| ID | 3626194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1067939 |
|---|
| End bp | 1068850 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637699773 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_304440 |
|---|
| Protein GI | 73668425 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase
[COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATCC CTACAGCCAG GTACTCTGAA ACCGCAACTG TCAGGATCGA TTATGAGAAG
TGTAAGACTT GCGGCCTCTG TGTTAAAGTC TGCAAAGGAG CCCCTATCTA CCTTGAAAAC
GACAAAGTAA GGATCGACCA AACCCGCTAT TTTGGCTGCA TCGGCTGCGG GCATTGTGTT
GCAGTTTGTC CAACAGGAGC CATTGCGGTA GAAGGGAGAG ACATATCCCA GACTTCGTCC
ATATATCTCC CAGCAGAAGA GTCCCGAGCC GGATACGAAG AACTTATGGC TCTCATGCTT
TCCAGGCGCA GCATCCGGGA ATTTGAAGAC AGAGAAGTTG AAAAGGAAAA AATAGACCGA
ATCCTGGCAG CAGCAAGCAC GGCACCCATG GGGATTCCAC CTTCGGATGT TGAGGTCCTG
GTTATAAACG GAAAAGAAAA AGTAAGGGAA TTTTCCGATG ACATGTTAAA GCTTATAAAA
AGCCAGAAAT GGATATTTTC GAAACCCGTA CTTCTCCTGA TGCGACCTTT CATGAAGAAG
GAAGAATATG AAGTTATTGA CAAATTCGTG TATCCGGCGA TTGAAATCTT TGAAGAATAT
AGAAAAGAAA ATACTGATTA CCTGCTCTAC GGAGCACCCC TTGCTATGTA CTTCCATGTT
TCTCCTTATG CTGATCCAGC AGATCCTTTT ATCACAGCCA CCTATGCAAT GATTGCCGCC
GAAGCCCTGA ACCTTGGAAG CTGTATGATA GGAACCATTG GCCCAATGCT GAAAAGTGGG
GGCAAAGAAG TGAAAGAAAA GTACGGAATC AATATCCGAA ACCAACCGGG AATAGTGGTC
ATTTTCGGAT ACCCCGCAGT AAAGTACAGA CGCGCTATCA GGAGAAATCT AGCAAAAATC
CATTATTATT AA
|
|---|
| Protein sequence | MAIPTARYSE TATVRIDYEK CKTCGLCVKV CKGAPIYLEN DKVRIDQTRY FGCIGCGHCV
AVCPTGAIAV EGRDISQTSS IYLPAEESRA GYEELMALML SRRSIREFED REVEKEKIDR
ILAAASTAPM GIPPSDVEVL VINGKEKVRE FSDDMLKLIK SQKWIFSKPV LLLMRPFMKK
EEYEVIDKFV YPAIEIFEEY RKENTDYLLY GAPLAMYFHV SPYADPADPF ITATYAMIAA
EALNLGSCMI GTIGPMLKSG GKEVKEKYGI NIRNQPGIVV IFGYPAVKYR RAIRRNLAKI
HYY
|
|---|
| |