| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0884 |
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| Symbol | gatB |
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| ID | 3626192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 1064178 |
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| End bp | 1065665 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637699771 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_304438 |
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| Protein GI | 73668423 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTATG AAAATCCTGA CGGAGTAAGA ATCGGGCTTG AGATCCATAT TCAATTGAAT
AAACTTAAGA CCAAGATGTT TTGTGGTTGT TCTACAGACT ATCACAATGC AGCCCCAAAC
ACTCACACCT GTCCAATCTG TCTGGGCCTT CCGGGAACAC TTCCGGTTCT GAACAAAAAA
GCAGTTGAAG CCGCAATTAA AGTAGGACTT GCCCTTGAAG GAGAGATCGC AGAAGAGACA
CAGTTCCACA GGAAGAACTA TTTCTATCCT GATCTTCCCA AAGGTTTCCA GATTACGCAG
TATGATTTCC CAATCGTAAG CAACGGGAAA GTTGTAATTG AAGGAGAAGA CGGAGAACAT
ACGGTAGGGA TTACAAGAGC CCACATGGAA GAAGACCCAG GCAAACTTGT GCACATCGGA
AGTATAGAGA AGTCGAAAGG TGTCCTTATC GATTATAACA GATCAGGCGT GCCCCTGATT
GAGACTGTTA CAGAACCTGA TATGCGCAGC CCCAAAGAAG CTAGAAGGTT CCTTGATAAG
TTCAGGAATA TCCTTGAGTA TCTGGATGTT TTTGATGGTA ACCTTGAAGG AGCAATGCGT
GTGGATGCAA ACGTTTCAGT CCACTGGGGT ACCCGTGTTG AGGTTAAGAA TATCTCTTCG
CATAAAGGAG TTGAAAAAGC TCTTCTTTAT GAGATTATGC GCCAGAAGAA TGTAATCCGG
CGTGGAGGAA AAGTCTCACA GGAGACTCGT CACTTCGATG AAGGTAGAGG CGTAACGCTC
TCAATGAGAA CAAAAGAGGA AGCTGAGGAT TACCGTTACT TCCGCGAACC TGACCTTATG
CCTATGCGCA TTACCGGTTG GATTCCTTCA ATTAAGAAAA CTCTACCTGA ACTTCCAGAC
GCAAAACGTG CTCGTTTTAT AGAGCAGTAC GGAATTACGG ATATGCATGC AAAGTCTCTT
ACATCAAAGA TTATGCTTGC TGACTTCTAT GAAAGCGTCT GTGCAAAAGG AGTGGACCCG
AAGATTGCAG CTACCTGGAC GGCTGATGTC TTCCTTGGAG AATTAAATTA TCGTGACCTT
GAAATCTCCT CTTATGACGG GAAGAAAATA GGTTTTATCC ACGCAAAAGA CCCAGGGATA
AAGAATTCCA TAAAGGCTTC AGATATGGTA GAACTGATTA ACCTTTTTGC CGAAGGTAAA
ATCAGTGACA GGGCTGCCGT TGAAGTCATT CGAACTATGC TGGACGCTGC GGAGGAAAAG
ACCCCGTCTC AGATTATCGA AGAAAAGGGC CTTTTCAAAG CCGAAGACGA CCTAGTGACT
AAAGCAATTG CTGAAACAAT CGCCGAAAAT GAAGCTGCAG TACAGGACTA TATTGGAGGC
ACGGAGAAAT CACTGAACTT CCTCGTGGGA CAGGTCATGA AAAAGACAAA AGGTACGGCA
GATGCAAAAA CTGCACGCGA ACTGATAATT AAAGAACTGA AAGGGTAA
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| Protein sequence | MVYENPDGVR IGLEIHIQLN KLKTKMFCGC STDYHNAAPN THTCPICLGL PGTLPVLNKK
AVEAAIKVGL ALEGEIAEET QFHRKNYFYP DLPKGFQITQ YDFPIVSNGK VVIEGEDGEH
TVGITRAHME EDPGKLVHIG SIEKSKGVLI DYNRSGVPLI ETVTEPDMRS PKEARRFLDK
FRNILEYLDV FDGNLEGAMR VDANVSVHWG TRVEVKNISS HKGVEKALLY EIMRQKNVIR
RGGKVSQETR HFDEGRGVTL SMRTKEEAED YRYFREPDLM PMRITGWIPS IKKTLPELPD
AKRARFIEQY GITDMHAKSL TSKIMLADFY ESVCAKGVDP KIAATWTADV FLGELNYRDL
EISSYDGKKI GFIHAKDPGI KNSIKASDMV ELINLFAEGK ISDRAAVEVI RTMLDAAEEK
TPSQIIEEKG LFKAEDDLVT KAIAETIAEN EAAVQDYIGG TEKSLNFLVG QVMKKTKGTA
DAKTARELII KELKG
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