| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0879 |
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| Symbol | |
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| ID | 3626187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 1058686 |
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| End bp | 1059423 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637699766 |
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| Product | DNA polymerase sliding clamp |
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| Protein accession | YP_304433 |
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| Protein GI | 73668418 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00590] proliferating cell nuclear antigen (pcna) |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAGG CAGCAATTAA TGCAGAGCTT CTGAAAGACG CGGTTGCCGC ACTAGCTGTA
ATTGTAGATG AGGTCAGATT CAAGATAAAC CCTGAAGGTA TTTCGGTAAA AGCCGTTGAC
CCTGCCAATG TTGCAATGGG AATTTTCGAA CTTGGATCAT CTGCTTTCGA CGAATATAAT
GCTGATGAAT GTGAAATTGG AGTCGACCTG AATAAGATTA CGGACCTGCT GGGAATTGCG
GATAAGAATG ACACAGTCCG GATGGAACTT GAAGAAGAAA ATCACAAACT CTTGATTGAT
GTCGGAGGGC TGTCTTATAC ACTTTCTCTT CTCGATCCTT CCACAATTCG GGCAGAACCA
AGAGTTCCAC AGCTCGAATT GCCTGCCAAA GTCGTCCTTA ACGGTGCAGA CCTCAGACGT
GCTGTTAAAG CTGCCGAAAA AATAAGCGAC CATATGCTTA TGGGAGTTTC GGACGATACA
TTCTATATGG AAGCAAAAGG CGATACCGAC CAGGTTCGTC TCGAGATGGG CAGGGACCAG
CTAATCGATC TGAAGGCAGG CGAAGCATGT TCTCTTTTCT CTCTGGATTA TCTGACCGAT
ATAGTCAAAC CCACAAACAA AGTCAATGAA GTTACTCTGT CCCTTGGAAA AGACTTCCCA
ATACTCATAG ATTTCGAAAT TGCGAATGGT TCAGGAAGGA TTTCTTACCT CCTGGCTCCA
AGAATTGAGT CGGACTGA
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| Protein sequence | MFKAAINAEL LKDAVAALAV IVDEVRFKIN PEGISVKAVD PANVAMGIFE LGSSAFDEYN
ADECEIGVDL NKITDLLGIA DKNDTVRMEL EEENHKLLID VGGLSYTLSL LDPSTIRAEP
RVPQLELPAK VVLNGADLRR AVKAAEKISD HMLMGVSDDT FYMEAKGDTD QVRLEMGRDQ
LIDLKAGEAC SLFSLDYLTD IVKPTNKVNE VTLSLGKDFP ILIDFEIANG SGRISYLLAP
RIESD
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