| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0845 |
|---|
| Symbol | |
|---|
| ID | 3625583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1023183 |
|---|
| End bp | 1023836 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637699734 |
|---|
| Product | monomethylamine corrinoid protein |
|---|
| Protein accession | YP_304401 |
|---|
| Protein GI | 73668386 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5012] Predicted cobalamin binding protein |
|---|
| TIGRFAM ID | [TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 59 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAACC AGGAAATATT TGACAAGTTA CGCGACGCGA TCGTAAATCA AAACGTTGCA
GGCATTGCGC AACTAACCCA GAAAGCCCTC GATGCAGGAA TTCCGGCACT TGATATTATT
ACAAAGGGTC TTTCCGTTGG AATGAAAATT GTCGGTGACA AGTTCGAAGC CGCTGAGGTA
TTTCTGCCCC AGATTATGAT GTCTGCAAAA GCAATGAACA ATGCAATGGA ACTTCTCACC
CCCGAACTTG AAAAGAACAA AAAGGAAGGA GAAGAAACAG GTCTTGCAAT CACTTTTGTT
GCAGAAGGAG ACATTCACGA CATTGGTCAC AGGCTTGTTA CCACCATGCT CGGGGCAAAC
GGGTTCCAGA TTCTTGACCT CGGGATTGAC GTTCTTAATG AAACCATTGT AGAAGAAGCT
GCAAAGCACA AGGGAGAAAA AGTCCTCTTA GTAGGCTCTG CCCTTATGAC CACCTCCATG
CTTGGCCAGA AAGACCTTAT GGACAGGCTC AATGAAGAAA AACTCAGAGA CAATGTAAAG
TGCATGTTCG GAGGAGCACC AGTATCTGAT AAATGGATCG AAGAAATCGG AGCTGATGCA
ACTGCAGAAA ACGCTGCAGA AGCCGCAAAA GTAGCACTTG AAGTTATGAA ATAA
|
|---|
| Protein sequence | MANQEIFDKL RDAIVNQNVA GIAQLTQKAL DAGIPALDII TKGLSVGMKI VGDKFEAAEV
FLPQIMMSAK AMNNAMELLT PELEKNKKEG EETGLAITFV AEGDIHDIGH RLVTTMLGAN
GFQILDLGID VLNETIVEEA AKHKGEKVLL VGSALMTTSM LGQKDLMDRL NEEKLRDNVK
CMFGGAPVSD KWIEEIGADA TAENAAEAAK VALEVMK
|
|---|
| |