Gene Mbar_A0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0815 
Symbol 
ID3626837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp987598 
End bp990354 
Gene Length2757 bp 
Protein Length918 aa 
Translation table11 
GC content40% 
IMG OID637699706 
Producthypothetical protein 
Protein accessionYP_304372 
Protein GI73668357 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCA AACATACTGA TGGCTGGGAG CCTATAACAT ACCAAGAATT ATTAGATGAA 
AATAAGCTAT TGGTGGATGA AAACCGTACC TTAAAAAACA AGATACAGTG TCTAAGAGCA
TATTTGAAGC AGGATAAAGA ACCTAAGTAT GATATTGATA AACCAGATCT AGAGAGAAGG
CAGGCACATC TTCTGGTGAA AGCCGATCTA GAAGCACTGA CCCGAATACA TGAGCTGAGT
ACAAAACTTT TGGGGTCGGA AGGGATCCAA CCACTATTAA AAGAAATAAT GGACGCAGCA
ATCTCTGTCG TGAACGCAAA AATGGGGACC TTGCAACTCC TTGAGGATGA TTCACTACAT
ATTGTTGCTC ATTATGGTCA CAAACAGCCT TTTTTGGATT ATTTTACATC TGCTGAGAAC
GTGGCTTCAG TTTGTGGAAA GGTGATGCAA CGTGGAGAAC GTATTGTTAT TGAAGATGTT
GAAACAAGTT CTATATTTGC CGGGACACCT TCCCTGACTG TGATGCGTGA GGCTGGAGTA
CGAGCGATTC AGTCCACACC GATGTTAAGC CGAACGGGTG AGCTTCTTGG TATCCTTACA
ACTCAATGGA ATTTTCCTTA TTCTCCAAAC GAGCATGATC TCTGGAGGCT TGACCTACTA
GCGCGTCAGG CAGCTGATAT GATAGAACAG GCTAGGTCAG AAGAAGCATT GAATGATAGC
AAAAAATGTT TAATGGCCGA CCTTAATGCT ATGACCAGGC TGCATAAGAT TGGTACTCTG
TTTGTTCGTG AAAGCAATCT TGAACCAGTT CTTGTTGAAA TAGTCGATGC AGCAATTGCA
ATTTCTGACG CTGACTTTGG CAATATCCAA TTACTGGATC CCGAATCATC TGAACTTAAG
ATTGTAGCTT CTCGTGGATT TCCCAAATGG TGGTTGGACT TCTGGGACAG TGTATCTGTG
GGAAATGGAA CTTGTGGTAC GGCGCTTGGA CGTGAAGAGA AGGTAATTGT CGAAGATATT
GAACAAAGCC CAATTTTTGT AGGTACACCT GCTCTGGAAA TCCAACTTAA AGCTGGAATA
CGAGCGGTAC AATCTACACC AATTGTGAGC CGATCAGGAA GATTACTCGG CATGTTCTCA
ACACATTATA AAAAACCACA TAAATTACAA GATCATGGTC TTCAGTTAAT TGACCTGCTA
GCTCAGCAGG CGGCAGATAT TATAGAGCGA GCGCAAATCG AAGAGATGTT ACGTAAGTCA
GAAGAGCGCT TTCGTGTCGC TTTGCAGGGA TCTTCTGTTG TTATTTCCAG TCAAGACCGT
GATCTGAGAT ACACGTGGGC TTATAACCCT TCGCCTGGTT TTAAACTAGA AGATCTTCTA
GGTAAGAATG ATTATGATAT CTATCAATTA GATGATGCTG AGGCTTTTGT CTCCATCAAA
AAGCAGGTTT TGGCTAGTGG TGTTAGCCAA TGTGATGAAG TGGTTATCCA TAGGCCTGCT
TCCGCTGGTG GGGATTTATT CCATGAGATG ACCACTGAGC CATTGCGCGA TGCTACAGGA
ACCATCGTTG GAGTCATCTG TATTGCAGTT GACATTACCG AGCGCAAAAG AGCTGAAGAA
GCATTAAAAA AAGCAAATGA TACTTTAGAA GAAAAAATTA AAGAGCGTAC AGTTGAACTC
GAAGAGGCTT ATAACTCATT ACTTGAAAAT AAAATGAGAC TAAGTGAAGC TCAAAAAATA
GCTCATCTCG GAAATTGGGA CTGGAATCTG GTGACTGATG AATTATATTG GTCAGATGAA
ATACACAATA TTTTCGGACT TGACTCTCTG GAATTCGATG AGACTTATGA TGCATTTTTG
AATCTTGTTC TTCCAGAAGA TCGAGAATAT GTGAATAATG CTTTTAAGAA AGCTTTTTGT
GGGAAATCTT TCGAAATTGA TTTTAGAATT ATCTCAGCTG ATAGAGAAGA ACATATACTT
TATGCACGGG GACAAGTGAT TTTTGATGAG AAAAATACTC CTATTAGGGT TAGAGGAATA
GTTCAAGATA TAACTGAACG TAAAAAAACA GAAGAAGCTC TGGTAAAACT CGAAAAAGTC
CGCATAAAAG AGATTCACCA CAGAATCAAA AATAACTTGC AGGTAATCTC TTCACTTTTG
GACCTCCAGG CTGAAAAGTT TGAGGATAAG AAAGTCAAAC AAGCTTTCAG TGAAAGTCAG
AACCGGGTAT TTTCAATGTC TCTGATCCAC GAAGAACTCT ACAAAGGAGG ACAGGCAGAA
AAACTGAACT TTTCAGCATA TCTTGAAAAG TTAGCTGATA ACCTGTTGAT GACTTACAGA
CTTAGCCGCA TAAATATTCG CTTGAATATG GATCTGGAAG AGAACGCATT TCTTGATATG
GATACTGCTG TTCCTTTAGG CATAATTGTT AATGAACTAA TTTCCAACTC TCTCAAACAT
GCATTTACTG AAAAGAAAGA AGGAGAAATT GGAATTCAAC TTCGTAGGCA TGAAGAGACG
ATAAATGGAA TTCACAAGTC CGATTTCTGT CTGAAAGTTT CAGATAATGG AAAAGGAATC
CCTGAAGATC TGAAGTTAGA AAGCGTCGAG TCACTTGGCA TGCAGTTAAT AAACACTCTA
GTAAATCAGT TAGACGGGGA GCTTAAATTG AAAAGGAACA AAGGTACTGA GTTTACTGTA
AGGTTCAAAG TAATAGAAAA AACACCTAAG TATCAGCGAC AAACTTACAG TCCTTGA
 
Protein sequence
MTTKHTDGWE PITYQELLDE NKLLVDENRT LKNKIQCLRA YLKQDKEPKY DIDKPDLERR 
QAHLLVKADL EALTRIHELS TKLLGSEGIQ PLLKEIMDAA ISVVNAKMGT LQLLEDDSLH
IVAHYGHKQP FLDYFTSAEN VASVCGKVMQ RGERIVIEDV ETSSIFAGTP SLTVMREAGV
RAIQSTPMLS RTGELLGILT TQWNFPYSPN EHDLWRLDLL ARQAADMIEQ ARSEEALNDS
KKCLMADLNA MTRLHKIGTL FVRESNLEPV LVEIVDAAIA ISDADFGNIQ LLDPESSELK
IVASRGFPKW WLDFWDSVSV GNGTCGTALG REEKVIVEDI EQSPIFVGTP ALEIQLKAGI
RAVQSTPIVS RSGRLLGMFS THYKKPHKLQ DHGLQLIDLL AQQAADIIER AQIEEMLRKS
EERFRVALQG SSVVISSQDR DLRYTWAYNP SPGFKLEDLL GKNDYDIYQL DDAEAFVSIK
KQVLASGVSQ CDEVVIHRPA SAGGDLFHEM TTEPLRDATG TIVGVICIAV DITERKRAEE
ALKKANDTLE EKIKERTVEL EEAYNSLLEN KMRLSEAQKI AHLGNWDWNL VTDELYWSDE
IHNIFGLDSL EFDETYDAFL NLVLPEDREY VNNAFKKAFC GKSFEIDFRI ISADREEHIL
YARGQVIFDE KNTPIRVRGI VQDITERKKT EEALVKLEKV RIKEIHHRIK NNLQVISSLL
DLQAEKFEDK KVKQAFSESQ NRVFSMSLIH EELYKGGQAE KLNFSAYLEK LADNLLMTYR
LSRINIRLNM DLEENAFLDM DTAVPLGIIV NELISNSLKH AFTEKKEGEI GIQLRRHEET
INGIHKSDFC LKVSDNGKGI PEDLKLESVE SLGMQLINTL VNQLDGELKL KRNKGTEFTV
RFKVIEKTPK YQRQTYSP