| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0809 |
|---|
| Symbol | |
|---|
| ID | 3626831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 974831 |
|---|
| End bp | 977038 |
|---|
| Gene Length | 2208 bp |
|---|
| Protein Length | 735 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637699700 |
|---|
| Product | surface layer protein B |
|---|
| Protein accession | YP_304366 |
|---|
| Protein GI | 73668351 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3291] FOG: PKD repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGGAG GGATTAAAAT AAAAAAATTG ACCACTTTGA TAGTAGCTAT TTTCATATTA
TCATTAATAT CAAGTCTTGG AGCTGCAACT GAGATTATAG TGCAGCCAGG AGATTCTATT
CAAAATGCTG TGAATAGTTC GTCTTCCGGC GATATAATTA CCGTAAAACC CGGAACCTAT
ACTGAAAATA TCATAGTAGC TAAAAATGAT CTTACAATCC GGTCAGAATC CGGAAACCCT
GATAATACGA TGATCAAAGC CAAAAGTTCA GGGGCCAGTG TGCTCCTCCT GCAGGGAAAC
AACATAAAAA TAACTGGATT TAAGACTGTA GGAGCAACCC GGTCTGGCAA TGCAGGAATC
TGTCTGTCTT CGTGTAGTAA CTGCATAGTT GAGAACAATG AACTTTTGAA CAACTGTTAC
GGAACCTATC TCCTGCGTTC CAAAGAGAAT AAAATCTCAA AGAATACAGC TACGAACAAT
AGGGAATATG GAATTGTACT GGGGACTGCT ACAGACAATA CCCTTTCAGG AAATACGGCT
TTTGGTAACG GTCGTGGGAT CCATGTTGGT AACTCTGACG GCAACACATT CTCAGGCAAT
ACCATTCAAG ATAATAGTGT TTATGGGCTT TATGTCTGTC CTAGAAGCGA CACTAATCAC
ATTTACAACA ATTACTTCAA TGACAATAGT ATGACTATTA GAAATGGAAT CGGAAATACC
TATTATACCA AAAAAACCGC AGGTACTAAT ATTGTGGGTG GCCCTTATAT AGGAGGCAAC
TTCTGGGGAA AACCTGATGG TACAGGATTT TCCAATACCG CAGTAGATAA AAACAGGGAT
GGAATTTCCG ATTCTCCATA TAAAAACATA ACAGGCAGCA TTTGTTCAGA TAACCTTCCT
CTAGTTGTTT ATAAATCTGG ATCAATAAAA CCCGTTGCTG CATTCTCTGC ATCTCCTACT
TCAGGAAGAG CACCATTAAA AGTTAAATTT ACTGACAAAA GTACAGGATC ACCAACCAAA
TGGAAATGGG ATTTTGGAGA TGGATCAAAG TCATTCCTTC AGAATCCTAC GCATAAATAT
TCCAAAGAAG GAAAATACAC GGTAACCCTC AAAGTAACCA ATGCAGCAGG CATCAACACA
GCAACAAAAT CAAAGTATAT CACAGTGACA AAAAAACCCG TTGCTGCATT CTATGCATCT
CCTACTTCAG GAAAAGTGCC ATTAAAAGTT AAATTTACTG ACAAAAGTAC AGGATCACCA
ACCAAATGGA AATGGGATTT TGGAGATGGA TCAAAATCAT TCCTACAGAA TCCAACGCAT
AAATATTCCA AAGAAGGAAA ATACACAGTA ACACTAAAAG TAACCAATGC GCTAGGCATC
AACACAGCAA CAAAATCAAA GTATATCACA GTGACAAAAA AACCCGTTGC TGCATTCTAT
GCATCTCCTA CTTCAGGAAG AGTACCATTA AAAGTTAAAT TTACTGACAA AAGTACTGGA
TCACCAACCA AATGGAAATG GGATTTTGGA GATGGATCAA AGTCATTCAT ACAGAATCCA
ACGCATAAAT ATTCCAAAGA AGGAAAATAC ACAGTAACAC TAAAAGTAAC CAATGCGGCA
GGCATCAACA CGGCAACAAA ATCAAAGTAT ATCACAGTGA CAGAAACTTC GCAAACTTCG
ACTACTGCAC TTTCTGCATC TCCAACTCCG ACTGCTGCAC TTTCTGCATC TCCAAAATCA
GGAAATGCCC CATTAAACGT TACTTTTACT GACAAAAGTA CAGGATCACC AACTAAATGG
AAGTGGGATT TTGGAGACGG AGAAACTTCA ACAACTAAAA ACCCAACTCA TGAGTATTCA
GCCACAGGAA AATACACAGT AACACTGACA GCAGGCAATG CAGCAGGTAG TAACACAACA
ACGAAATCAA AGTATATTAT AGTAACAGAA ACTTCCCAAG CTCCTGTTGC AGATTTTTGG
GGCTCGACGC TCTCAGGAAA CGCTCCATTA AATGTAACAT TTACGGAGAC AAGCAAAGGA
TCACCAACTT CGTGGAAATG GGATTTTGGA GATGGGACAT CGTCAACAGA AAAGAGTCCA
ACACACACAT ATTCAGCTGC AGGAACTTAC ACGGTTAAAC TTACATCAAC AAATGCAGCA
GGAAATAGTA CAAAAACAAA ATCAAATTAT ATAAAAGTGG CAAAGTGA
|
|---|
| Protein sequence | MEGGIKIKKL TTLIVAIFIL SLISSLGAAT EIIVQPGDSI QNAVNSSSSG DIITVKPGTY
TENIIVAKND LTIRSESGNP DNTMIKAKSS GASVLLLQGN NIKITGFKTV GATRSGNAGI
CLSSCSNCIV ENNELLNNCY GTYLLRSKEN KISKNTATNN REYGIVLGTA TDNTLSGNTA
FGNGRGIHVG NSDGNTFSGN TIQDNSVYGL YVCPRSDTNH IYNNYFNDNS MTIRNGIGNT
YYTKKTAGTN IVGGPYIGGN FWGKPDGTGF SNTAVDKNRD GISDSPYKNI TGSICSDNLP
LVVYKSGSIK PVAAFSASPT SGRAPLKVKF TDKSTGSPTK WKWDFGDGSK SFLQNPTHKY
SKEGKYTVTL KVTNAAGINT ATKSKYITVT KKPVAAFYAS PTSGKVPLKV KFTDKSTGSP
TKWKWDFGDG SKSFLQNPTH KYSKEGKYTV TLKVTNALGI NTATKSKYIT VTKKPVAAFY
ASPTSGRVPL KVKFTDKSTG SPTKWKWDFG DGSKSFIQNP THKYSKEGKY TVTLKVTNAA
GINTATKSKY ITVTETSQTS TTALSASPTP TAALSASPKS GNAPLNVTFT DKSTGSPTKW
KWDFGDGETS TTKNPTHEYS ATGKYTVTLT AGNAAGSNTT TKSKYIIVTE TSQAPVADFW
GSTLSGNAPL NVTFTETSKG SPTSWKWDFG DGTSSTEKSP THTYSAAGTY TVKLTSTNAA
GNSTKTKSNY IKVAK
|
|---|
| |