Gene Mbar_A0797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0797 
Symbol 
ID3627916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp958597 
End bp962925 
Gene Length4329 bp 
Protein Length1442 aa 
Translation table11 
GC content44% 
IMG OID637699688 
Producthydrogenobyrinic acid a,c-diamide cobaltochelatase 
Protein accessionYP_304354 
Protein GI73668339 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.92548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACGG CACAAGGTAG ATTATTGGTT TTATGTGCAG TGGTCCTTTT ACTGCTAGCA 
CAGAGCGTAT CGGCTGATGA AAATCATGTA AATATTACTT TTATCTGTTA TGATGGGAGC
GCCCTTGCTG CAGCAGAGCA GTCCAATCCA TATAATGCAA GTATAAATGT AACGTATCTT
TCGGGATATT CCGATTTTAG CAATGTCACT TTTGAAAACC AGGATGTAAT ATTTACTTAT
ATGCTCTGGT CACAATTCGA AGACATTGGA GACGATCTTG AAAGCGCCCA CGAAAACGGG
ACCGCACTCA TAGATATTAC TTCTGCAATG GATACAACAT ACATCAACAC CTCAAATTAT
GATAAGATTT TTTCCGGGAC TATCCCATAT AATTCTACTG AAGAAAAATT CTTCTATAAT
ATGGGTTCCA GAGGAGTCCT GAAGGAAAAC ACTGAGAACT TCCTCATATA TCTCGCAAAA
ACTTATGGAG ATAAACCTGA GCTTACGAAA GACTGGGTTT ATGAAGATCC TATCGAATTC
CCTGAAGCAG CAATTTATCA TCCGGATGCT CGTTCTCTCA CTAATGAATC TCAGCCAGAC
TGGTTTGAAA ATACTACTGA TTACCTTGAA TGGTACTCTA CCTCAACGAA CTCAAATTCA
ACTAACTCAA ATGAATCACG ACATATTTAC GACAAGAGCA AACCCACTAT AGGGATATGG
TTCCATGCTT CCGACTATAC AGGTGACAAC CTTGAAGTCA TAGATGCTCT TATCCACGAT
CTGGAAGGAA AGGGCTGCAA CGTAATTGCA GGTTTTGATA CTTTCAACGA TATTCATAAG
TTTTACTTTG ACGAAAGCGG AGAACCTCTT GTCCAGTGTG TAATTTCTCT TAAGAGCTTC
CGTTTGAATT ATGATGATCC TGATAAAGGT GTACAGGAGC TTGAAGACCT TGATGTGCCT
GTCCTCACGG GATTGGTTGT TACAAACCCT GCTAATTCTA CTGACATAGC TGATAGTAAT
AGAGGTATCC CCAGTGAAGA GGTTGTATAC AAGACTCTGC TCCCGAGCAT TGACGGGATT
TTCGAGTACA TTGTAATAGG AATTGATAAT TATGATTCCG CAACAGGTGA AAGCAACTAT
GAACCTCTGC CTTCTCAGAT TGACTGGATG GCAAACAGGT CGATTAACTG GGCAAGCCTG
AAGTTAGAAG AAAACGAAGA CAAGAAAGTA GCTATGATTT ACTATAATTA TCCTTCAGGA
AAGGACAATA TTGTAGCAAA TTATCTCAAC TCCACCCAGA GCATGTTTGA ACTCCTGAAT
GCAATGAATA AAAGTGGCTA TGAGGTCTCC GGAATTCCGG AAAACAGTAG TAAGCTCATG
GAGATGCTTC AGGCCCAGGG CATCAATGTT GGTTCCTGGG CTCCCGGAGT TCTGAATGGA
ATGGTGGAAA ATAGGACTGA ATGGGGCCTT CAACTCATAC CTGTGGATAC CTATAAAGAG
TGGTTTGGGT CTGAAATTCC GGAAAATCTG AGAGCCAATG TAACAGCTGA ATGGGGAGAA
CCCTGGTCCG AAGATCTGCC TCAAAATAAG AGTGTTATGA TCTATGAGAA TGAAACCGGT
AAATACATTG TAATTCCAAC GGTGCGTTTC GGAAATGTCT GGCTCATGCC TCAGCCTGCC
AGAGGAACAG GACAAAATAA TGACACCCTT TACCACAGCA ACGTTGTACC TCCCACACAT
CAGTATATAG CTTTCTATCT CTGGCTAAAC CATGAATTCC AGCCTGATGC GCTTATTCAT
ATGGGCACGC ACGGTACGCA TGAATGGCTC CCGGGCCCCA CTTACGGCAT GAACCGGACT
GCAGACTGGT CTCCTCTTCT GCTTCAGGAC ATTCCGAATA TCTACCCCTA TATCGTTGCC
AACGTGGGAG AAGGAATAAC TGCAGAGTAC AGGGGTAATG CTCTAATTAT TGACCATTTG
ACTCCAACCC TTGAACGCGG TGGGCTTTAT GGAGATTTGC TAAACCTTTC AACTGATGTG
GAGGGGTATT ACGACCCCGG GATTTCTTCT CAGACAAGAG CAGGATATCA GAATGCCATA
GTAAATGAGA TAATAGCACT CAACCTCAGT GTTGATCTGG GTATAGAAAA TGTAACTGTT
CTTCAAGATT ACAACGAAAC GGAGTTTGGA AATTTCGTTA AAAACATTCT TCATGAATAC
CTGGAAGACG TAGGAAATGA AAATATCCCA TACGGTATGC ATATCCTCAG CCATGTTCCT
ACGACGAATA TAACAGGTCC TGAAAGTGAT GAACTTACCG GAATGGTAAG GGCTATGCTT
GGAGGTAGCT TTGAGGATAA TATCACTGCC GCCTTCTACC CTGAATCTTC ATATCCTCTT
GGAATTCCAT TGAATGATAC AAAAGTTACC AGACTTGTCT GGGAAGTCGT AACCAATAAT
ACGAGCGTTT CTCAGGCGCA GACTGCAGTT TATGGGATAA CTAACAGCAC GGTTACACTT
GATCTCGAAC AGGGGCTGGA TTATAAAGAC AGGCTCCTTA ACTGCGATGT GGAGATTGAC
AGAATTCTTT CAGCCCTGAA CGGAGGCTTT ATTCCACCAG GTTCTGGGCT GGACCCTGTA
ATGAATCCGG ATGCAGTTCC TACAGGGCGC AATTATTACA GCATAAATTC GAAGCTCTAT
CCCTCAGAAG CAACCTGGGA AGTTGGAAAG TCTCTTGCAA TCCAGATGCT TGAGGACTAT
TATAATGAAC ATGGGGAATA CCCTAAAAAA GTTTCATTCT CAAGGTTCGG GGTGGAGTTT
ATTGCGGACC ACGGGACTCT GGAAGCCGAA GTGCTCTACC TGCTTGGAGT AAAACCTGTA
TGGGACGAGT ACGGGTATGT AACCGGAGTT GAAGCTATCC CTGAAGATGA ACTATTGCCA
AATTATGATA CTTCAACTCC TGGGAGGCCG CGTATTGATA TTGTTTATAC TACCGCAGGT
ATGAGGGACG CTTTCCCGGA TAAGATCAAA ATGATAGATA GTGCTGTAAA GCTTGCAAGC
TCTCTTCCTG GCGTAAACTA TCCAAATTAT GTAAATCAGA GCTCTCTCAC ACTCTACGAT
TCCCTGATAT CTGAAGGGTA TGACAACGAG ACTGCAACAA AGATCTCTAC AATGCGCTGC
TTTGCAGTAA TGGACGGCAC TTATGATATA GGGGTCTCAG ATGCTATCAG TGCAAGCGGG
TCATGGGATA ATGAAGAAGA TATTGCAAAT GTATACTTGA ACAAGATGGG ATACGCTTAC
GGAGAAGATT TCTGGGGAAT ACAGTCCAGA GCACTCCTGG AAGGCAACCT GAAAAGCGTT
GAAGCTTCAG TACATTCGTC CTCTTCAAAC CTTTATGACT CCCTTGATAA CGATGACCTT
TTCCAGTATT TCGGCGGCAT GAACCTGGCA ACGAGGTATC TTAGCGGCAA TACTCCGGAG
ATGTATATTT CGGACACAAG TAACTCGGAC GGGGCTCAGA TGTTGGGAAT GCAGGAGTAC
CTCAGCAAGG ACTTGCGGGC CAGATATTTC AACGACAAAT GGATCGAAGG AATGCAAAAA
TCCGGATACT CAGGCGGCAG CATGATGTCC GAATTTGTGG ACAACCTCTT TGGATGGGAG
GTAAGTGACC CTGACCTTGT GGACGATACT GTCTGGCAAG AAGTGTATGA AACCTATGTA
AATGATCCTT CTATGAAAGA ATGGTTCAAG CAGAATAATC CCAGTGCTTA CCAGTCTGTA
ACAGCGAGAA TGCTTGAGGC AGTCAGGCAC GATTACTGGA CACCCTCAGA GGATGTCATT
GAAAGCCTTT CAAAGGAATA CGAAGAGTCT GTCGCCGAGA ATGGGGCTTC ATGCTGTCAC
CACACCTGTG GAAATCCCCT GCTTCATGAA TTCGTAAGTG GAAAAGTATC TGTTCCGGGC
TACTCCGAGC AAATAGAAGC GGCAACCAAA GTCGAAACTC TGGAGACCAC AGAAGAGACC
CAGAGCAGTA GCGGTGGTAG CCATCACGAC CATGATACTG GAAATGCTAC CGTAATACCA
AGAGCCAGTT CATCCAGTAA CCAGACGTCT CAAGATTCGG ACGGAGGATA TGGTACAGAT
ACTTCCGAAC CTGATCCTGA AGTTCAGAAA TCTTCAGATA CTGATTATGT TGAAGGGTAT
GAGATGCAGA AAGATTCTGC TGAAGAACCT GATAATAGTG GGTTCTCGTT TTCGGGATCT
GATATTATCG GAATTCTCCT TGTAGTGGTA GCCGCCGGCG GAATTTACCT AGGCATGAGA
AAGAGATAA
 
Protein sequence
MRTAQGRLLV LCAVVLLLLA QSVSADENHV NITFICYDGS ALAAAEQSNP YNASINVTYL 
SGYSDFSNVT FENQDVIFTY MLWSQFEDIG DDLESAHENG TALIDITSAM DTTYINTSNY
DKIFSGTIPY NSTEEKFFYN MGSRGVLKEN TENFLIYLAK TYGDKPELTK DWVYEDPIEF
PEAAIYHPDA RSLTNESQPD WFENTTDYLE WYSTSTNSNS TNSNESRHIY DKSKPTIGIW
FHASDYTGDN LEVIDALIHD LEGKGCNVIA GFDTFNDIHK FYFDESGEPL VQCVISLKSF
RLNYDDPDKG VQELEDLDVP VLTGLVVTNP ANSTDIADSN RGIPSEEVVY KTLLPSIDGI
FEYIVIGIDN YDSATGESNY EPLPSQIDWM ANRSINWASL KLEENEDKKV AMIYYNYPSG
KDNIVANYLN STQSMFELLN AMNKSGYEVS GIPENSSKLM EMLQAQGINV GSWAPGVLNG
MVENRTEWGL QLIPVDTYKE WFGSEIPENL RANVTAEWGE PWSEDLPQNK SVMIYENETG
KYIVIPTVRF GNVWLMPQPA RGTGQNNDTL YHSNVVPPTH QYIAFYLWLN HEFQPDALIH
MGTHGTHEWL PGPTYGMNRT ADWSPLLLQD IPNIYPYIVA NVGEGITAEY RGNALIIDHL
TPTLERGGLY GDLLNLSTDV EGYYDPGISS QTRAGYQNAI VNEIIALNLS VDLGIENVTV
LQDYNETEFG NFVKNILHEY LEDVGNENIP YGMHILSHVP TTNITGPESD ELTGMVRAML
GGSFEDNITA AFYPESSYPL GIPLNDTKVT RLVWEVVTNN TSVSQAQTAV YGITNSTVTL
DLEQGLDYKD RLLNCDVEID RILSALNGGF IPPGSGLDPV MNPDAVPTGR NYYSINSKLY
PSEATWEVGK SLAIQMLEDY YNEHGEYPKK VSFSRFGVEF IADHGTLEAE VLYLLGVKPV
WDEYGYVTGV EAIPEDELLP NYDTSTPGRP RIDIVYTTAG MRDAFPDKIK MIDSAVKLAS
SLPGVNYPNY VNQSSLTLYD SLISEGYDNE TATKISTMRC FAVMDGTYDI GVSDAISASG
SWDNEEDIAN VYLNKMGYAY GEDFWGIQSR ALLEGNLKSV EASVHSSSSN LYDSLDNDDL
FQYFGGMNLA TRYLSGNTPE MYISDTSNSD GAQMLGMQEY LSKDLRARYF NDKWIEGMQK
SGYSGGSMMS EFVDNLFGWE VSDPDLVDDT VWQEVYETYV NDPSMKEWFK QNNPSAYQSV
TARMLEAVRH DYWTPSEDVI ESLSKEYEES VAENGASCCH HTCGNPLLHE FVSGKVSVPG
YSEQIEAATK VETLETTEET QSSSGGSHHD HDTGNATVIP RASSSSNQTS QDSDGGYGTD
TSEPDPEVQK SSDTDYVEGY EMQKDSAEEP DNSGFSFSGS DIIGILLVVV AAGGIYLGMR
KR