Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0791 |
Symbol | |
ID | 3627910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 953072 |
End bp | 953734 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637699682 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_304348 |
Protein GI | 73668333 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.271834 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTTG AAAACCTTTC CAAAACTTAT ACGCAGGGTA AAATCCCTGT CCATGCCCTT CGCTGTGCCT GCATAACTGT AAGAAAAGGG GAATTGCTTG CGATAATGGG GCCCTCAGGT TCCGGAAAAT CCACTCTCCT TGCACTTATA GGCACACTTG AAAAAGCCAC GGACGGAAAA ATAATTCTTG ACGGGACAGA CCTTACATCT GTACCTGAAA AACTGCTTCC CCGCGTGAGA AGAGAAAAAA TAGGCTTTAT TTTCCAGCAC TATAATCTTA TCCCTACACT TTCTGCACTT GAAAACGTTG AGCTTTCCAT GCGCTTTTCC AGAGTGCCCA AAAAAGAAAG AGGAGAAAGA GCCAGAAAGC TGCTAGAAGA ACTTGGCCTT GGAGACCGAC TTTCCCACAA GCCTTCGGAA TTATCAGGAG GAGAACAACA GAGAGTCTCT ATTGCCAGGG CACTTGCGAA TAAGCCTGCC GTTATCCTGG CTGACGAACC AACGGGTGAG GTGGACAGCA AAACCAGAGA CTCGATTGTG CGAGTCTTCA AAGAATTGAG CGAAAAAGGG CAGACGATTC TTGTTGTGAC GCACGACCCT GAAGTTGCAA AGGAGTGTTC AAGGGTGCTC AGGATTACGG ATGGGGTTAT TAAAGATTAT TAA
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Protein sequence | MQVENLSKTY TQGKIPVHAL RCACITVRKG ELLAIMGPSG SGKSTLLALI GTLEKATDGK IILDGTDLTS VPEKLLPRVR REKIGFIFQH YNLIPTLSAL ENVELSMRFS RVPKKERGER ARKLLEELGL GDRLSHKPSE LSGGEQQRVS IARALANKPA VILADEPTGE VDSKTRDSIV RVFKELSEKG QTILVVTHDP EVAKECSRVL RITDGVIKDY
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