Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0767 |
Symbol | |
ID | 3626385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 929275 |
End bp | 929874 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637699658 |
Product | nodulation protein L |
Protein accession | YP_304324 |
Protein GI | 73668309 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.55437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000843349 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTAGATC AAGAGATAGT TTCAATGAGT GAAAAAGTGT TGAATAAAGA CATTTTTGAG CGTGATAGGG CTGGAGAACC AGTTTCTATA GATGACCCGG AATATCCAAA GTTAAAGGAA ATGATGCTTC GTGCTGCGGA ACTAACCACC AGATTGAATA CTTCATTTCA TGATGAGGAT GAAATAAGGA GCCTGTTCAG TGAGTTGATA GGTTCGGAAG TGGATAAATC TTCGAGGGTA ACTCCTCCAT TCTATACGGA TTTCGGACGA AATATCAAGG TCGGTAAAAA TGTGTTTATC AATCATGCAT GCACCTTTAT GGATAGAGGA GGCATAACAA TCGAGGATGA CACCAAGATA GGACCAAAAG CCAATCTTAT CACATCCAAT CATCCATTGG ATCCAGCCCA TAGAAAGGAA TTAATTTCAA CTCCGATATG GATTAAAAGG AATGTATGGA TAGGTGCTGG TGCAACCATT TTACCCGGCG TAACTATCGG AGAGAACTCT GTTGTAGCAG CTGCAGCTGT CGTTACGCAA AATGTACCTC CTAACACAGT CGTGGCTGGT GTACCAGCAA AAGTTATCAA AACATTGTAA
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Protein sequence | MVDQEIVSMS EKVLNKDIFE RDRAGEPVSI DDPEYPKLKE MMLRAAELTT RLNTSFHDED EIRSLFSELI GSEVDKSSRV TPPFYTDFGR NIKVGKNVFI NHACTFMDRG GITIEDDTKI GPKANLITSN HPLDPAHRKE LISTPIWIKR NVWIGAGATI LPGVTIGENS VVAAAAVVTQ NVPPNTVVAG VPAKVIKTL
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