| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0765 |
|---|
| Symbol | |
|---|
| ID | 3626383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 927027 |
|---|
| End bp | 928010 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637699656 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_304322 |
|---|
| Protein GI | 73668307 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4925] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00000109433 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTA TTCCCGAATA TAATGGAATA AAATGGATGT TAATTTGTTT TGGAGTATTT
TTACTGGCAA TTTTAGTGAT AGGATGCATT GAACAAAATA ATATAGATCA AGGAAACATC
AGTAATCAAT CAGAAGATGA GCAAATAGAG CAAAAAGAGG CTCCCATGCC TTATGCACAG
ACTCTGGATG AGGGGGAAGA AATTTCTAAA GTGAAATCAT CTGAACAAAC TGTTTCAACA
GAGCCGGAGC ATGGTCTGGC TTTATCGGAT ATGAGCGTTA AAATCACTTC ACAGGGCCAT
ATAGCGACGT TCCAACTATA TGATACGGTT GCCTCCAAAG AATTGTATGA ACAATTGCCA
CTGGAACTAG ATCTAACGAA TTTCCGTGAT GCACAGTGGA TGTTCTATCC ACCAAAGAAA
CTGAATGTTA CTGCACAAGA GGCTTATCAT GACGGTAAAA AGGGCGAACT CAGCTACTAT
GGACCATGGG GCGATGTGTT CATGCTCTAT GAGGATTTCT ATGCTGGTGA CGAGATGCAC
CGTTTAGGCA TATGCATCAC TGGAATAAAT GAGATTGCCA ATATGTCGGG TAGCATGCAG
ATAGAAAAAA ATGAACTTAG TCAAGAAGAA GAGGAGACAA AAATGAGAAT CAGTATTCAA
GCAAGTGGAG AAACAACGAT TTATGAGCTC AATGATGGGA AAGCTGCAAA AGAACTCTAT
GAACAGTTGC CCTTAACGAT TGATGTTGAA GATTACAGCA ATAATGAAAA GATATTTTAT
CCACCCAAAA AACTCGATAC AACTAACACA CCTATGGCAA ATGCACAGTT TGGAACACTT
GCATATTATG CGCCATGGGG AGACGTAGTA ATGTTTTATG ATAGGTTCGG CTCTGCAGGC
GGTTTATATG AGTTAGGAAA TGTCATATCA GGCGGCGAGC ATATCAAAAA CATGTCAGGT
ACGATACAGA TCAAGAAAGT GTAA
|
|---|
| Protein sequence | MKIIPEYNGI KWMLICFGVF LLAILVIGCI EQNNIDQGNI SNQSEDEQIE QKEAPMPYAQ
TLDEGEEISK VKSSEQTVST EPEHGLALSD MSVKITSQGH IATFQLYDTV ASKELYEQLP
LELDLTNFRD AQWMFYPPKK LNVTAQEAYH DGKKGELSYY GPWGDVFMLY EDFYAGDEMH
RLGICITGIN EIANMSGSMQ IEKNELSQEE EETKMRISIQ ASGETTIYEL NDGKAAKELY
EQLPLTIDVE DYSNNEKIFY PPKKLDTTNT PMANAQFGTL AYYAPWGDVV MFYDRFGSAG
GLYELGNVIS GGEHIKNMSG TIQIKKV
|
|---|
| |