Gene Mbar_A0764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0764 
Symbol 
ID3626382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp925681 
End bp926673 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content40% 
IMG OID637699655 
Productmembrane protein 
Protein accessionYP_304321 
Protein GI73668306 
COG category[R] General function prediction only 
COG ID[COG1073] Hydrolases of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000138363 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGGGAA ATATGGAATC TGAAAATGAA TCAAGTATGA GAACTTTTGA GCTCAGTGAA 
AAGGTAACTG TAGAAAAAGT ATCCTATAAA AACAGGTACG GAATTACCGT TGTAGCAGAC
ATGTACCTGT CAAAGGACAT AGATAAGTCT AAAAAATACC CAGCAATTGT CATAGGAACA
CCTTATGGTG GTGTAAAAGA GCAAGGTGCT GGTATTTACG CACAGAATAT GGCAGAACGA
GGATTTGTTG CCATTGCGTT CGATGAATCT TTTAATGGCG AAAGCAGTGG TGAACCAAGG
CATGTCTCTT CTCCAGATAT ATTTGTTGAA GATTTTAGTG CAGGAGTAGA CTTTTTGGGA
ACACGACCTT TTGTGGACAG AAACAGGATC GGCGCAATCG GTATCTGTGG AAGTGGTGGA
TTTGCCGTTA CTGCAGCTCA AGTTGACCCA CGTATCAAAG CAGTTGCTAC TGCAAGTATG
TATGATATAA GTAGCATGAT AAGAGATGGA TTTGGAAAAA CAATGACTGA TGAACAGCGT
GCTCAAACTT TAGTTCAGTT GGGTGAGCAA CGATGGAAAG ATTTTGAGAA TGGTACTCCA
GAAGTGCCTG TGGGTTTCCC AAGTGAACCA GCTGATTCAA TTCCAGAAGG ATTAGATCCA
ATTTCAAGTG AATTTTTTGA ATACTACGGA ATGGAGCGTG GACATCATCC TAATGCAGGA
GCCGCATTCA CTATTACAAG TAGCATGTCT TTCATGAATT TTCCTTTGAT GAACTATATT
GATAACATTT CACCACGACC AATTTTGTTC ATCATCGGTG AAAATGCTCA CTCTAGATAT
TTTAGTGAAG ATGCCTATGA AAGAGCTGCT GAACCCAAAG AACTCTACAT CGTTCCGGGA
GCAAGACATA TTGATCTGTA CGACAGGACC GACATGATTC CATTTGACAA ATTAGAATCA
TTCTTTGCAA AATATCTAGG TTACAACAAA TGA
 
Protein sequence
MSGNMESENE SSMRTFELSE KVTVEKVSYK NRYGITVVAD MYLSKDIDKS KKYPAIVIGT 
PYGGVKEQGA GIYAQNMAER GFVAIAFDES FNGESSGEPR HVSSPDIFVE DFSAGVDFLG
TRPFVDRNRI GAIGICGSGG FAVTAAQVDP RIKAVATASM YDISSMIRDG FGKTMTDEQR
AQTLVQLGEQ RWKDFENGTP EVPVGFPSEP ADSIPEGLDP ISSEFFEYYG MERGHHPNAG
AAFTITSSMS FMNFPLMNYI DNISPRPILF IIGENAHSRY FSEDAYERAA EPKELYIVPG
ARHIDLYDRT DMIPFDKLES FFAKYLGYNK