| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0732 |
|---|
| Symbol | |
|---|
| ID | 3624433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 883820 |
|---|
| End bp | 885802 |
|---|
| Gene Length | 1983 bp |
|---|
| Protein Length | 660 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637699624 |
|---|
| Product | transporter |
|---|
| Protein accession | YP_304290 |
|---|
| Protein GI | 73668275 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2064] Flp pilus assembly protein TadC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTATA CTATTCTGGA TGAACTAGCA TACCAATTTT ATGGGGACTT TTTCTATAAA
AACAAAGATT ATTTTCAGGA CTTAAAGGTA AAAATACGTC ATTCTCATAT CTCTATGTCA
GTAGACCAAT ATCTGGCTTC TACCTTCATG TACTCCGTAA TTGTAGGAAT TGCTGAAGGA
GTCTTTGGCT TATGGCTGGG ACTAAAAATC TTTGGGAATC CGGTTTCCCG ACTTAGCCTT
TTTGTAGACC CTGGACATGC CGACATTGCA GGTAAATATG TATATCCTCT TGCGCTTCTC
GTTGGCCTTA TACTGTTTCT TGTAAGTTTT TTTGTCGTAT TTCTTGTAGC ATATATCTAT
CCTTATTTCC AGGCAAATAA CCGGCAAGCT TCTATCGATA AATCCATGCT TCCGGCAATA
ACTTACATGT ATGCCCTGAC AAAGGGAGGC ATGTCAATTT ATGACGTTTT CCGGTCTTTG
AGCAGGTACA GCTATATATT TGGGGCAACT GCGGAAGAAA TCTCCTATGT TGTAAGAGAT
ATGGACTATC TGGGAAAGGA TTTCATAACT TCCCTTAAAA TTGCCAAGGA ACGCACCCCT
TCAGAAATTT TCAAAGACTT TGTTGATGGA TTGATTATTG TTTCAAGCAG CGGAACCATA
ACCGAATATG TCAAAAATAA GTCCGAACAA TATCAGGGTC TGGCCGAGAT GGCGAATAGA
AACCTGTTAC AGAGACTTGA TGTACTTGCC GAAATCTATG TAACAGCTCT TGTTGCAGGC
CCTCTTTTCG TAATGGTAAC CCTTGTTGTG CTACAGTTTT TCCTGCCGGC TTCAGCTCAG
ATCCTTTACA TGCTTATTTA TATAATACTA CCTCTTGCAA CCCTGCTTTA TTTGGTACTT
CTCGATACTG TAGGAGAACT CTCCATTGAT CCTAAAAAAG GTGACGTTCG CAGTTTTACA
ATAAACCTTT CCGATATCCC AGAAATTGAC TCAGAGCTTA CTGAAGAGGT GGAGCAAAAA
AGGAAAAAGA CGTACATGCT ATACAGGGGA CTTTATAGGC TCAGAGACAT GGTTCTTAAC
CCTTACAGAA CTATCCGGAA TGAGCCAAGA TACACGTTTT TCTTCGGAGT TCCACTTGGA
TTGTACTATC TTACCCAACT TCCAAGAAAC CTTAGAAACA GCCTCTTTTC TAGTTTTCAT
CACCTGAGTA TAAGTTTTGA CCATGTCTCT GACAGTGCTA TAAAGCTAGT TACTGCTGTC
GATGATTATT TTGTTATCTT TATTGTTGTT GCCCTTATTC CTTTTATAAT TTTTTACGAA
ATAAAAGCGT GGAGGATGCG CAAAATTGAT GAGAAAATGC CCGATTTTTT GAAAAGCCTT
TCCAGCATGA ATGAATCCGG GATTATGCTT GCAAATTCCT TAAAAATAAT ATCTGAATCC
AAAATGGGAA TTCTCAGTAA AGAACTTAAA AAATTAAAGG AAGATCTTTC CTGGGGCACT
TCCACCTCTA AAGCCCTTAT GAACCTTGAG AACAGCATCA AAACACCTTC TTCAAGCCGA
ATTCTCCACA TTATCGTAAA AGCAAATGAG TCTACAAGTG ACCTTAAAAA TGTACTCTCG
ATTACTGCTA AACAGGCTAG AAATGACGAG GATATGAAAA AAGAGCGCTC ATCAACAATG
GTAGTTTATG TCATTACAAT CTATGTAGCC TTTTTCGTTT TCCTGTTCAT AGTTTATATC
CTGGCTACTA ACTTCTTCCC ACAAACGTCT TCTTTCTCCA CCTCTTCACA AGGAATAGGG
GGAATAGGCG GATATTTTAA TGTCGAAGAG TACAGTATGC TCATGTTCCA CTCCGCCCTA
GTACAGGCTT TCACTTCCGG GATTGTTGCC GGGAAAATGG GGCAGGGCTC AACATATCTG
GGCCTGAAGT ACAGTGTAAG CATGGTAATA ATAACTTATG TGGCTTTCAC CATGTTTGTT
TGA
|
|---|
| Protein sequence | MTYTILDELA YQFYGDFFYK NKDYFQDLKV KIRHSHISMS VDQYLASTFM YSVIVGIAEG
VFGLWLGLKI FGNPVSRLSL FVDPGHADIA GKYVYPLALL VGLILFLVSF FVVFLVAYIY
PYFQANNRQA SIDKSMLPAI TYMYALTKGG MSIYDVFRSL SRYSYIFGAT AEEISYVVRD
MDYLGKDFIT SLKIAKERTP SEIFKDFVDG LIIVSSSGTI TEYVKNKSEQ YQGLAEMANR
NLLQRLDVLA EIYVTALVAG PLFVMVTLVV LQFFLPASAQ ILYMLIYIIL PLATLLYLVL
LDTVGELSID PKKGDVRSFT INLSDIPEID SELTEEVEQK RKKTYMLYRG LYRLRDMVLN
PYRTIRNEPR YTFFFGVPLG LYYLTQLPRN LRNSLFSSFH HLSISFDHVS DSAIKLVTAV
DDYFVIFIVV ALIPFIIFYE IKAWRMRKID EKMPDFLKSL SSMNESGIML ANSLKIISES
KMGILSKELK KLKEDLSWGT STSKALMNLE NSIKTPSSSR ILHIIVKANE STSDLKNVLS
ITAKQARNDE DMKKERSSTM VVYVITIYVA FFVFLFIVYI LATNFFPQTS SFSTSSQGIG
GIGGYFNVEE YSMLMFHSAL VQAFTSGIVA GKMGQGSTYL GLKYSVSMVI ITYVAFTMFV
|
|---|
| |