Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0731 |
Symbol | |
ID | 3624432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 881958 |
End bp | 883634 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637699623 |
Product | type II secretion system protein |
Protein accession | YP_304289 |
Protein GI | 73668274 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACGATG TAAAAGAAAT GCTAGCGAAG AATATGTTTA TTTCGGGGTT ATTGGAGAAA AAAGGTAACT ATAACTCCAT AGCTGAGGTT GTAAAAAGGG CTAGAAGTTA CTTTGATAGG CCTTTGAGGA CTCTGCCAGC TTATGACCCG GAAAAAGATG GACCTCTTGT AGATTTTATA GTGCCTGACG AATTAAGAGA ACTCGAAAGA TACTGGCTTC AGGAGCCTTA CACTTTTGTA TCGATTATGG AAGACCGTAG ATCAACATAT TACAGGCTTA TTGAACCTTC TCTTACAAAA TTTGAGAAGG AGCTTCTTGA AAGAATATAT GAAGATTTTC AAGATATCCT GATTCTTGGG TCTACGCATT CCAGATCCGA AAAGGATACA TTTCTGGTAG ATAGAGCCCT CTTTCTTCTT GAACGTTATA AAGCTGACAT TTCTAAAGCC ACACTCCTAA AAATTATATA TTATCTTAGA AGAAACCTGC TGGGATACGA GAAAATCGAT CCTCTCCTTT ATGATCCTTA TATAGAGGAC ATTTCATGTG ATGGAGTGGG AGTCCCTCTC TATGTTTATC ATAACAGATA TCTCAATGTT GAATGTAATA TTACTTTTGA AGAAGAGGAA CTTGATGCTC TTGTAATCAA GATGTGCCAG TTGAACAATA AACACGTTTC TGTAAGCCAG CCAATCGTGG ATGCAACAAT TCAGGATGGT TCAAGACTTC AAGCTGTTTT AGGAAGAGAG ATTACCCCCA GAGGCAGTTC TTTTACTATC CGTAAGTTCA GAAAAGATCC AATGACTCCT ATAGACCTGC TTAGCTATAA GACGTGCGAC CTTGACATGC TTGTGTATTT CTGGATGGTT ATCGAAAACG GCTACAACAT GCTTTTTGCA GGGGGGACAG CTTCAGGAAA AACGTCTATA CTGAACGCTA CATCTCTGTT CATGCCTTCT ACAACGAAGA TAGTTTCGAT CGAAGATACA AGGGAACTTT TACTCTACCA TAATAACTGG GTTTCCGGGG TTGCAAGAGA GGGGTTTGCT GCAGACTCTT CGGGAGAAAT TACCATGTAC GACCTCTTAA GAGCCGCTCT CAGACAGCGC CCAGATTATA TTATTGTGGG TGAAGTAAGA GGCGGTGAAG CTCTTACTCT TTTCCAGGCG ATGTCAACAG GACATGCAAC AAGCTCAACA ATGCACGCAG GAGATGTACA GACCGTTGTA AACAGGCTCA CTCATGAGCC AATAAACGTG CCTCACGTCA TGCTGCAGTC TCTGAATGTG CTCTGTATTC AGGAGCAAGT GTACATAGAA GAAAAAAGAG TTAGACGAAC CCGAAGTCTT GTAGAAGTTA TGAATGTCGA TCCTGAAACA GGAGATCTGG GTATAAATGA GCTTTTCAAC TGGGAACCTT TAGAGGACTG CTTCATTAAT GTAGGGGATT CTCACATTCT ACAGGAAATT ATGACTGTAA GAGGATGGGA TACCAGTCAG TTGAGAAACG AGATAGAGAA TCGGAGAACA ATTCTGGCTT ATATGTACGA AAAAGGCATA AGGAACTATG TTCAGGTGTC CATTGTAGTT CAGGCATACC AGACTCATCC AAAAATGGTT ATGGAAGCTA TAGAAAACGA TACACTAGAG AGTATGATAC AGAATATGAC TGCTTAA
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Protein sequence | MDDVKEMLAK NMFISGLLEK KGNYNSIAEV VKRARSYFDR PLRTLPAYDP EKDGPLVDFI VPDELRELER YWLQEPYTFV SIMEDRRSTY YRLIEPSLTK FEKELLERIY EDFQDILILG STHSRSEKDT FLVDRALFLL ERYKADISKA TLLKIIYYLR RNLLGYEKID PLLYDPYIED ISCDGVGVPL YVYHNRYLNV ECNITFEEEE LDALVIKMCQ LNNKHVSVSQ PIVDATIQDG SRLQAVLGRE ITPRGSSFTI RKFRKDPMTP IDLLSYKTCD LDMLVYFWMV IENGYNMLFA GGTASGKTSI LNATSLFMPS TTKIVSIEDT RELLLYHNNW VSGVAREGFA ADSSGEITMY DLLRAALRQR PDYIIVGEVR GGEALTLFQA MSTGHATSST MHAGDVQTVV NRLTHEPINV PHVMLQSLNV LCIQEQVYIE EKRVRRTRSL VEVMNVDPET GDLGINELFN WEPLEDCFIN VGDSHILQEI MTVRGWDTSQ LRNEIENRRT ILAYMYEKGI RNYVQVSIVV QAYQTHPKMV MEAIENDTLE SMIQNMTA
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