Gene Mbar_A0731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0731 
Symbol 
ID3624432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp881958 
End bp883634 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content41% 
IMG OID637699623 
Producttype II secretion system protein 
Protein accessionYP_304289 
Protein GI73668274 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGATG TAAAAGAAAT GCTAGCGAAG AATATGTTTA TTTCGGGGTT ATTGGAGAAA 
AAAGGTAACT ATAACTCCAT AGCTGAGGTT GTAAAAAGGG CTAGAAGTTA CTTTGATAGG
CCTTTGAGGA CTCTGCCAGC TTATGACCCG GAAAAAGATG GACCTCTTGT AGATTTTATA
GTGCCTGACG AATTAAGAGA ACTCGAAAGA TACTGGCTTC AGGAGCCTTA CACTTTTGTA
TCGATTATGG AAGACCGTAG ATCAACATAT TACAGGCTTA TTGAACCTTC TCTTACAAAA
TTTGAGAAGG AGCTTCTTGA AAGAATATAT GAAGATTTTC AAGATATCCT GATTCTTGGG
TCTACGCATT CCAGATCCGA AAAGGATACA TTTCTGGTAG ATAGAGCCCT CTTTCTTCTT
GAACGTTATA AAGCTGACAT TTCTAAAGCC ACACTCCTAA AAATTATATA TTATCTTAGA
AGAAACCTGC TGGGATACGA GAAAATCGAT CCTCTCCTTT ATGATCCTTA TATAGAGGAC
ATTTCATGTG ATGGAGTGGG AGTCCCTCTC TATGTTTATC ATAACAGATA TCTCAATGTT
GAATGTAATA TTACTTTTGA AGAAGAGGAA CTTGATGCTC TTGTAATCAA GATGTGCCAG
TTGAACAATA AACACGTTTC TGTAAGCCAG CCAATCGTGG ATGCAACAAT TCAGGATGGT
TCAAGACTTC AAGCTGTTTT AGGAAGAGAG ATTACCCCCA GAGGCAGTTC TTTTACTATC
CGTAAGTTCA GAAAAGATCC AATGACTCCT ATAGACCTGC TTAGCTATAA GACGTGCGAC
CTTGACATGC TTGTGTATTT CTGGATGGTT ATCGAAAACG GCTACAACAT GCTTTTTGCA
GGGGGGACAG CTTCAGGAAA AACGTCTATA CTGAACGCTA CATCTCTGTT CATGCCTTCT
ACAACGAAGA TAGTTTCGAT CGAAGATACA AGGGAACTTT TACTCTACCA TAATAACTGG
GTTTCCGGGG TTGCAAGAGA GGGGTTTGCT GCAGACTCTT CGGGAGAAAT TACCATGTAC
GACCTCTTAA GAGCCGCTCT CAGACAGCGC CCAGATTATA TTATTGTGGG TGAAGTAAGA
GGCGGTGAAG CTCTTACTCT TTTCCAGGCG ATGTCAACAG GACATGCAAC AAGCTCAACA
ATGCACGCAG GAGATGTACA GACCGTTGTA AACAGGCTCA CTCATGAGCC AATAAACGTG
CCTCACGTCA TGCTGCAGTC TCTGAATGTG CTCTGTATTC AGGAGCAAGT GTACATAGAA
GAAAAAAGAG TTAGACGAAC CCGAAGTCTT GTAGAAGTTA TGAATGTCGA TCCTGAAACA
GGAGATCTGG GTATAAATGA GCTTTTCAAC TGGGAACCTT TAGAGGACTG CTTCATTAAT
GTAGGGGATT CTCACATTCT ACAGGAAATT ATGACTGTAA GAGGATGGGA TACCAGTCAG
TTGAGAAACG AGATAGAGAA TCGGAGAACA ATTCTGGCTT ATATGTACGA AAAAGGCATA
AGGAACTATG TTCAGGTGTC CATTGTAGTT CAGGCATACC AGACTCATCC AAAAATGGTT
ATGGAAGCTA TAGAAAACGA TACACTAGAG AGTATGATAC AGAATATGAC TGCTTAA
 
Protein sequence
MDDVKEMLAK NMFISGLLEK KGNYNSIAEV VKRARSYFDR PLRTLPAYDP EKDGPLVDFI 
VPDELRELER YWLQEPYTFV SIMEDRRSTY YRLIEPSLTK FEKELLERIY EDFQDILILG
STHSRSEKDT FLVDRALFLL ERYKADISKA TLLKIIYYLR RNLLGYEKID PLLYDPYIED
ISCDGVGVPL YVYHNRYLNV ECNITFEEEE LDALVIKMCQ LNNKHVSVSQ PIVDATIQDG
SRLQAVLGRE ITPRGSSFTI RKFRKDPMTP IDLLSYKTCD LDMLVYFWMV IENGYNMLFA
GGTASGKTSI LNATSLFMPS TTKIVSIEDT RELLLYHNNW VSGVAREGFA ADSSGEITMY
DLLRAALRQR PDYIIVGEVR GGEALTLFQA MSTGHATSST MHAGDVQTVV NRLTHEPINV
PHVMLQSLNV LCIQEQVYIE EKRVRRTRSL VEVMNVDPET GDLGINELFN WEPLEDCFIN
VGDSHILQEI MTVRGWDTSQ LRNEIENRRT ILAYMYEKGI RNYVQVSIVV QAYQTHPKMV
MEAIENDTLE SMIQNMTA