Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0726 |
Symbol | |
ID | 3625871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 875061 |
End bp | 876743 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637699618 |
Product | hypothetical protein |
Protein accession | YP_304284 |
Protein GI | 73668269 |
COG category | [R] General function prediction only |
COG ID | [COG3291] FOG: PKD repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA AAGAAAAAGC ATATTCAATA GCTTTAGCTT CAACATTGAT TATATTTTTA ATTTTGGCCT CATCTGCGAC AGCGGTACCG ATTAATGGAA GAGATCACAA ATTCACCGTA CCAGAAATCA CCGGCGGATC AGGAGACTCT TCCACTGACA CAGTTGTTTT AAATAAGTTA TCTACAGAGG GAAATGCTAC AGCCCCAGAA TCTATACAAG CTACCGCGTT AAAGCTCACT GAAACTCCAA TAACTACCAA TAAATTTGAA CAGTGGGATC CTATTGTCTA TGATAACAGG ATAGTGTGGT ATGATAATCG TAATGGAAAC TGGGATATCT ACATGTATGA TCTCTCCACT AAAAAGGAAA CTCAGATCAC TACAAATGTA TCAGATCAGT ATAGCCCCTA CATTTATGGT AACAGAGTAG TATGGGTCGA TGAGCGCAAT AGAAACCCTG AGGATTTCAG TGGGAACTCC GACATTTACA TGTATGATCT CTCTACTAAA AAAGAAACTC AGATCACAAA CAATGAAGGA TATCTATGGA GCTCCTCAAT CTGCGGTGAC AAGATGGTCT GGACAACTTG TCCCTACGGT GACCTCTCTG ATTTGTACGA TGTTTGTATG TACGACATCT CCACTAAAAC GGAAAAAATG ATAACCGACA ATGGATACTC ATATTATCCT GCAATCTACG GTAACAAGAT AGTATGGGTA GACTATCGCA ATGGATATAC TGATGTCTAC ATGTATGATA TTTCCACTAA AAAGGAAACT CAAATTACTA ACAATGAATC AGAGAAGATG TGTCCTGCTA TCTACGGCGA CAAAATAGTA TGGATGGATT CCCGCAACGA AAACTGGGAT ATCTACATGT ATGACCTTTC CACTAAAAAG GAAACTCAGA TCACCACCGG TCCATCAGAT TCACTTTATC CTGCAATCTA CGGTGACAGA ATCGTGTGGA ATAATAATCG CAAAGGAAAC TGGGACGTCT ATGTGTACGA TCTAGCCACT GGTCAGGAAT GGCACACTAC TGATAAATCA GATCAGTACT ATTCTGCAAT CTACGGTGAC AGGATAGTGT GGACAGATAT GCGTAATGGA AATCCTGATA TCTACATGGG TATTCTTTCG AAAAGTTCTC CGGTTGCTGC ATTTTCTGCA TCTCCAACTA CAGGAAAAGC TCCATTAAAT GTTGCCTTTA CAGATACAAG CACCGGTTCC CCAACTTCCT GGTTCTGGAA CTTTGGAGAT GGATCAAAGT CATTCCTCCA GAATCCGATC CACAAGTATT CCAAAGTAGG AAAATATACT GTTAGCTTAA CGGTAAAGAA TGCGGCAGGC CGCAACACGG TAACAAAAAC AGATTATATA AATGTAGTAA CAAAGCCGGT TGCTGCATTT TCGGCATCTC CGACTTCCGG AAAAGCACCA TTAAATGTCG CTTTTACTGA TAAAAGTACA GGAATACCGA CTAAATGGAA ATGGAGTTTT GGAGACGGAA CAATTTCAAG AGAACAGAAT CCAAAACATC AGTATTCACA GGAAGGAAAC TATAAGATTA CACTTAAGGT GACCAATGTT GCAGGCAGCA GTACTGTAAC AAAAACAAAT TACATAAAAG TGACAACAAA TACAAGACCA GGTATATACT CTAAAAGCGA AATAAATCCT TAA
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Protein sequence | MKKKEKAYSI ALASTLIIFL ILASSATAVP INGRDHKFTV PEITGGSGDS STDTVVLNKL STEGNATAPE SIQATALKLT ETPITTNKFE QWDPIVYDNR IVWYDNRNGN WDIYMYDLST KKETQITTNV SDQYSPYIYG NRVVWVDERN RNPEDFSGNS DIYMYDLSTK KETQITNNEG YLWSSSICGD KMVWTTCPYG DLSDLYDVCM YDISTKTEKM ITDNGYSYYP AIYGNKIVWV DYRNGYTDVY MYDISTKKET QITNNESEKM CPAIYGDKIV WMDSRNENWD IYMYDLSTKK ETQITTGPSD SLYPAIYGDR IVWNNNRKGN WDVYVYDLAT GQEWHTTDKS DQYYSAIYGD RIVWTDMRNG NPDIYMGILS KSSPVAAFSA SPTTGKAPLN VAFTDTSTGS PTSWFWNFGD GSKSFLQNPI HKYSKVGKYT VSLTVKNAAG RNTVTKTDYI NVVTKPVAAF SASPTSGKAP LNVAFTDKST GIPTKWKWSF GDGTISREQN PKHQYSQEGN YKITLKVTNV AGSSTVTKTN YIKVTTNTRP GIYSKSEINP
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