Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0724 |
Symbol | |
ID | 3625869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 872102 |
End bp | 874243 |
Gene Length | 2142 bp |
Protein Length | 713 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637699616 |
Product | cell surface protein |
Protein accession | YP_304282 |
Protein GI | 73668267 |
COG category | [R] General function prediction only |
COG ID | [COG3291] FOG: PKD repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAAGA AAGAAAAAGC GTACTCAATA GCTTTAGTTT CAACATTTAT AATTTTATTT TTGATTTTTG TTTCATCCAC GGCATCGGCA CTCGCGCATA TAATAGATAA TAACACCACA TTGAGCACCC CACCGGAGGT CAGCAGTGGA GCAGGCGATC CCTCAGATGA CCAGATTCCG TCCGATGAGT TATCTACCGA AGAAACTGAT ACAGCCACGG AATCTATACA AGCTGCTGAG CTCAAGATCA CTGAAAAGCG TATTACCACT AATAATTTCG AGCAGTCTGA CCCTGTTATT TATGGTAACA AAATCTTGTG GTATGATGAA CGCAATGGAA ATGGGGATAT CTATATGTAC GATCTTTCTA CTAAAAAAGA AACTCAGATA TCTATTATTG ATGCAGAAGG GACATTTGCT CCTGCAATCT ACGGTGACAA GATTGTCTGC ATGGGTTATC GCGGTGAACC CTATGAAGGT TACGACATTT ATACGTACGA TATTTCCACT AAAAAGGAAA AAAGGATAAC TGACGACTCA GCAGTTTTCT CTGCTCCTGC AATATACGGG GACAGAATAG TGTGGGAAGA TAATCGCCGA TATGGATCCA CTGGAATGGA CGATATCTAC ATGTACAACT TATCTACTTC CAAGGAAACC CGGATCACTA ATAGCGGATC TGCAAACTAT CCTGCTATCT ACGATAACAG GATAGTATGG GTAGACTCTC GCAATGGATA TACTGATGTC TACATGTACG ATATATCTAC TAAAAAGGAA ACTCAAATTA CTAACAATGA ATCAAAGAAG ATGTATTCTG TTATCTGCGG TGACAGAATA GCGTGGATGG ATAATCGTAA TGGAAGCTGG GATATCTACA TGTATGATCT TTCCACTAAA AAGGAAACTC CGATCACAAA TCATGAAACT ACCTGCTATC CTGAAATCTA TGGTGACAGA ATAGTGTGGT CTGATGGTCG CAATGGAAAC TGGGACGTCT ACGTGTACGA TCTAGCCACT GGTCAGGAAT GGCACACTAC TGATAAATCA GATCAGTACG ATCCAGAGAT CTATGGTGAC AGGATAGTAT GGACAGATCT GCGCAATGGA AATCGCGACA TTTACATGGG TACCCTTTCG AAAAGCTCTC CAGTTGCTGC ATTTTCTGCA GCTCCAACTA CAGGAAAAGC ACCACTGAAG GTTAAGTTTA CTGACACAAG CACAAGGACA CCTGCTAAAT GGATATGGGA CTTTGGAGAC GGATCAAAGT CATTCCACCA GAATCCAACT CACAAGTATT CAAAAGCAGG AGTATATACT GTTAGCTTAA CAGCAAAGAA TGCTGCAGGT AGTAACACGG TAACAAAAAC AGAATATATA AAAGTGATAA CAAAACCAGT TGCTGCCTTT TCAGCCTCTT CTACTTCAGG AAAAGTACCA CTGAAGGTTA AATTTACTGA CACAAGTACA GGAATACCTG CTAAATGGAA ATGGGAATTT GGAGATGGGT CAAAGTCATA CCACCAGAAT CCAACTCATA AGTATTCAAA AGCAGGAGTA TATACTGTTA GCTTAACAGT AAAGAATGCT AAAGGCAAGA ACACGGTAAC AAAATCAAAG TATATAACCG TGACATCAAA ACCCGTTGCT GCCTTCTCTG CATCTCCAAC CTCAGGAAAA TCTCCATTAA ACGTTAAATT TACTGACAAA AGTACCGGAT CACCAACGAA ATGGAAATGG GATTTTGGAG ACGGAACAAA GTCATTCCAT CAGAATCCAA CGCATAAGTA TTCCAAAGCA GGAAAATACA CAGTAACCCT CAAAGTAACC AATGCGGTAG GCATCAACAC AGCAACAAAA TCAAAGTATA TAACCGTGAC AGGAACTTCG CAAGCTCCGA CTGCGGATTT CTGGGGCTGG CCATTATCAG GAAAAGCTCC GCTAAAGGTA AAATTTACGG AGACGAGCAA AGGATCACCA ACGAAATGGA AATGGGATTT CGGAGATGGA AAATATTCAA CAGAAAAGAG TCCAACACAC ACATATTCAG CAGCAGGAAC TTACACGGTT AAACTCATAG CAACAAATGA AGCAGGAAGT AGTACAAAAT CAAAATGGAA ATATATAAAA GTGGCAAAGT GA
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Protein sequence | MKKKEKAYSI ALVSTFIILF LIFVSSTASA LAHIIDNNTT LSTPPEVSSG AGDPSDDQIP SDELSTEETD TATESIQAAE LKITEKRITT NNFEQSDPVI YGNKILWYDE RNGNGDIYMY DLSTKKETQI SIIDAEGTFA PAIYGDKIVC MGYRGEPYEG YDIYTYDIST KKEKRITDDS AVFSAPAIYG DRIVWEDNRR YGSTGMDDIY MYNLSTSKET RITNSGSANY PAIYDNRIVW VDSRNGYTDV YMYDISTKKE TQITNNESKK MYSVICGDRI AWMDNRNGSW DIYMYDLSTK KETPITNHET TCYPEIYGDR IVWSDGRNGN WDVYVYDLAT GQEWHTTDKS DQYDPEIYGD RIVWTDLRNG NRDIYMGTLS KSSPVAAFSA APTTGKAPLK VKFTDTSTRT PAKWIWDFGD GSKSFHQNPT HKYSKAGVYT VSLTAKNAAG SNTVTKTEYI KVITKPVAAF SASSTSGKVP LKVKFTDTST GIPAKWKWEF GDGSKSYHQN PTHKYSKAGV YTVSLTVKNA KGKNTVTKSK YITVTSKPVA AFSASPTSGK SPLNVKFTDK STGSPTKWKW DFGDGTKSFH QNPTHKYSKA GKYTVTLKVT NAVGINTATK SKYITVTGTS QAPTADFWGW PLSGKAPLKV KFTETSKGSP TKWKWDFGDG KYSTEKSPTH TYSAAGTYTV KLIATNEAGS STKSKWKYIK VAK
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