Gene Mbar_A0717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0717 
Symbol 
ID3625862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp863765 
End bp864982 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content48% 
IMG OID637699609 
Productaconitase subunit 1 
Protein accessionYP_304275 
Protein GI73668260 
COG category[S] Function unknown 
COG ID[COG1679] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTTA CAAAAGAAGA AGAGCAAATC CTGAATGGAG AAGCCGGGGA GACTCTAAGG 
CAGGCTATTG AAATCCTGGT GGCTCTTGGA GACATTTACG GTGCGGACAG GCTTATCCCA
ATCAAAAGCG CCCAGATAGC AGGGGTTTCC TACAAAACTA TGGGCGATGC AGGTCTTGAA
TGGATTTCAG ACCTGAAAGG AAAGGTTAAG GTTCCTGCAA TTCTGAACCC TGCCGGAATG
GATCTGCAAG ACTGGGAAAG GCTCAGGATC TCGCCCGAGT TTGCGGAAAA ACAAAAATTG
ATTGTCCAGG CATACGAAAA ACTGGGAATT CGGTGTGAGT GTACATGTAC GCCTTATACT
CTCGAGGGAT TCGATGTCGG TTATGGTGAC CACCTGGCAT GGAGCGAATC GTCAGCTGTC
TCCTATGCAA ATTCCGTAAT TGGGGCCAGG ACTAACCGGG AAGGTGGGCC ATCAGCTCTT
TCTGCGGCAC TCCTCGGGAA AACCGCAAAC TATGGATTCC ATCTGGATGA AAACCGTGTG
CCTGAGATTT CATTTGATGT AGAGTGTCCA CTGAGTGGAT CGGATTACGG TGCGCTCGGT
TATGTAGCTG GGAAACTTGC AGGGAGTAGG GTGCCTGTTT TTCATATAAG GAGTACTCCG
GATGCGGATG AGTTAAAAGC ACTAGGAGCT GCAATGGCAG CTTCGGGAGC AGTTGCTCTT
TACCACGTAA AAGGAGTCAC GCCTGAGAAT TGCAGGGTGG AGTTTGAAGA GCCGTCAGAA
AAAATAACTA TTGAGAAAAG CCAGATTGAC GAGGTTTATG AGAGCCTGAA AAAAGCCTGT
AAAGAACCCG AATTGATAAC CATAGGGTGT CCTCACTGCT CGGCAGCGGA ACTTGAAAAA
GCAGCCAAAC TCCTGAGAGG AAAAACGGTT TCAAAAGAAT TCTGGATCTT TACCTCAAGG
GAACTTGCAA AACGCTATCC TGAGTATGTC GGGACCATTG AAGAAAGTGG AGCTAAGGTT
GTCTGTGATA CCTGCATGGT AGTATCTCCT GCTACCAACA GCTATTCCTG CGTCATGGTA
AACTCAGGAA AAGCACTTGC TTACGTGCCA GGGATGTGCG GAGCTGAAGC TGTATATGGA
AGTATGGAGG CCTGTGTCAA GGAAGCAGTA GGCGAAGCAG CAAAGAAGGT AGTAAAGAAG
GCAGGTGATT CCAATTAA
 
Protein sequence
MYLTKEEEQI LNGEAGETLR QAIEILVALG DIYGADRLIP IKSAQIAGVS YKTMGDAGLE 
WISDLKGKVK VPAILNPAGM DLQDWERLRI SPEFAEKQKL IVQAYEKLGI RCECTCTPYT
LEGFDVGYGD HLAWSESSAV SYANSVIGAR TNREGGPSAL SAALLGKTAN YGFHLDENRV
PEISFDVECP LSGSDYGALG YVAGKLAGSR VPVFHIRSTP DADELKALGA AMAASGAVAL
YHVKGVTPEN CRVEFEEPSE KITIEKSQID EVYESLKKAC KEPELITIGC PHCSAAELEK
AAKLLRGKTV SKEFWIFTSR ELAKRYPEYV GTIEESGAKV VCDTCMVVSP ATNSYSCVMV
NSGKALAYVP GMCGAEAVYG SMEACVKEAV GEAAKKVVKK AGDSN