Gene Mbar_A0714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0714 
Symbol 
ID3625859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp857778 
End bp860582 
Gene Length2805 bp 
Protein Length934 aa 
Translation table11 
GC content48% 
IMG OID637699606 
Productaconitate hydratase 
Protein accessionYP_304272 
Protein GI73668257 
COG category[C] Energy production and conversion 
COG ID[COG1048] Aconitase A 
TIGRFAM ID[TIGR01341] aconitate hydratase 1 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGAAG GTCCGGACCC ATTTGGGGTC AGAGACACAA TTGAAACAGC TGCCGGAAAA 
GCTACGATTT ACAGTCTGGG TAAACTGGAA GAAAAGGGCT ATGAGGGAAT TTCCCTGCTT
CCTTACTCCA TAAGGATCCT GCTGGAATCT CTGCTCAGGC ATGCAGATAC TGAAAAGCAT
ATAATAACTG CTGAGGATGT GGAGGCTCTT GCTCGCTGGA GCCCGGAAAA TATAAGTGAC
AGGGATATTC CGTTCATTCC ATCAAGGGTG ATCATGCAGG ACTTTACAGG CGTTCCGGCT
GTAGTAGACC TGGCAGCCCT CCGCTCGGCA ATGCAGCGCC TTGGAGGCGA TCCCGCAAAA
ATAAATCCTG TTATCCCTGC CGATCTTGTT ATTGACCACT CGGTCCAGGT GGATTCTTAT
GGCACGGCAT ACGCTCTCGA GGAAAACGAG AAAAAGGAGT TTGAACGCAA CACGGAACGC
TATTCTGTCC TGCGCTGGGC CCAGAAAGCC TTTGACAATT TTAGAGTTGT GCCTCCAGGA
AGGGGCATTA TCCATCAGGT GAACCTTGAG TATCTGGCCC CGCTTGTGCA TCTTAAAGAG
AAAGATGGGG AGTTATTTGC ATTTCCTGAT ACTCTTGTAG GGACAGACTC CCATACTACA
ATGATTAACG GAATTGGAGT ACTCGGCTGG GGAGTAGGAG GCATAGAAGC CGAAGCCGTA
ATGCTCGGGC AGCCTTATTA TATGCCTGTG CCTCAGGTAG TGGGCTTCAA ACTTTACGGA
AAACCTGCCC CTGGAGTTAC TGCCACCGAT CTTGTCCTGA CAATTACGAA GATGCTTAGA
AAAGAGGGAG TTGTCGGCAA ATTCGTGGAA TTTTACGGTC CCGGGTTAAA TTCACTGAGT
CTTCCGGACA GGGCAACGAT CTCAAACATG GCTCCTGAGT ATGGTGCAAC CCTTGGAATT
TTTCCGCCTG ATGCTGAGAC ACTTGACTAC CTGCGAAGAA CTGGCAGGAG CAAAGAGCAG
GTTGATCTTG TGAAAAAGTA TATGGAAGCT CAGGGCCTTT TTTATTCAAC TCATGATCCG
GACCCTGTTT TCAGCACTAC CCTGGAACTT GATATGAGCA CGGTAAAACC CTGTCTTGCA
GGCCCAAAGC GTCCTCAGGA CCAGCTTTTC TTGAGTGAGG TACCTGAAAA TTACCATGAA
ATTATGAAGC AGACCTTTAT CCGAAAGAAA GAATCAGGGC TTGAACTTTC CCAGGATCCT
GCTTACCAGC GCTGGATAGA AGACGGAGGA ACGCCTTTTG AGGAACCTGA AACTCCTGGT
GCAGAAGAGG AAATAAAGGA ATCTTCGGAA AAATCTTTCA GGGTAACACA TGGTTCCGTA
GTGATTGCAG CAATTACTTC CTGTACCAAT ACCTCAAACC CTTCAGTTTT AATAGGAGCC
GGGCTGCTCG CCAAAAGGGC TGTAGAAAAG GGCCTGCACG TCAAACCTTT TGTAAAAACA
AGCCTTTCCC CAGGTTCTAG AGTAGCTACG GAATATCTGA AAGCTGCAGG CCTTTTGCCC
TATCTCGAAG CCCTTGGTTT CCACCAGGTT GGTTACGGTT GTACAACCTG TATAGGAAAC
AGTGGACCTT TACCTGAAAA GGTTTCAAAA GAAATTAAGG AAAATGACCT TACTGTCGCA
GCCGTACTCA GCGGAAACCG TAACTTCGAA GGACGGATTA ATCCTCTTGT CAGGGCAAAC
TACCTTGCTT CTCCACCTCT TGTTGTGGCC TATGCAATCG CAGGTACCGT GAATATCAAC
CTCGAAACCG ATCCTCTTGC TTATGATCCA AACGGGCGCC CTGTTTACCT CAAAGATATC
TGGCCTGCAG AAAAGGAAAT AAGGGCCGCT GAAAAGAACA GCATCAAACC TTCAATGTTC
GAAAAAGAAT ATTCAGGTGC TTTAGAGGGC TCCAAACGCT GGAAAGAGCT GGAAGCTCCA
ACAGGTACTC TCTATGATTG GAACTCTATG TCTACATATA TTCAGGAACC TCCATACTTC
ATGGACTTCC CACCTGCTCC ACCTTCGCCT GCGGATATAA AGAATGCAAG AGTTCTGGCC
CTTTTCGGGG ACAGCATTAC CACGGACCAT ATTTCCCCTG CGGGTGCCAT TCCTTCAGAC
AGTCCTGCGG GCAGGTACCT GATTTCCTGG GGTGTGAGCC CTGAAGATTT CAATTCTTAT
GGGTCCAGGA GGGGTAACCA CGAGGTAATG ATGCGTGGGA CCTTTGGGAA TATTCGGCTC
AGGAACAGGC TCGTGGGCAG GGAAGGAGGA TGGACCGTAT ACCATTCCCG GAAAGAAGAC
TTCCCCGAGG AACCCTGTGA AGGAATCCCT ATTTATGACG CAGCCATGCT TTATGCGGAA
AATGATACTC CTCTGATCGT TATCGCAGGA AAGGAATACG GAACAGGCAG TTCCAGGGAC
TGGGCAGCTA AAGGTACGTT CCTGCTCGGA GTTAAAGCAG TTATTGCCGA GTCTTTCGAG
CGTATTCACA GAAGTAACCT TGTCGGCATG GGAGTTCTTC CATTGCAGTT TAAAGAAGGC
GAGAATGCCG ATACTCTGGG CCTTACAGGA AAGGAAAGTT ATGATATTCT GGGCATTGAA
TACATGGAAC CACAAGGAGA ACTTACTGTA AGGGCAAAAG ACGAAGATGG TAATGAAGTT
CAGTTCCAGG TAACTTTGAG GCTGGATTCG GCTGTAGAAG TCGAGTATTA CCTGAACGGT
GGAATTTTGC ATAAGTTCCT GCGGGATTCC GTGAAGAAAA ATTAA
 
Protein sequence
MREGPDPFGV RDTIETAAGK ATIYSLGKLE EKGYEGISLL PYSIRILLES LLRHADTEKH 
IITAEDVEAL ARWSPENISD RDIPFIPSRV IMQDFTGVPA VVDLAALRSA MQRLGGDPAK
INPVIPADLV IDHSVQVDSY GTAYALEENE KKEFERNTER YSVLRWAQKA FDNFRVVPPG
RGIIHQVNLE YLAPLVHLKE KDGELFAFPD TLVGTDSHTT MINGIGVLGW GVGGIEAEAV
MLGQPYYMPV PQVVGFKLYG KPAPGVTATD LVLTITKMLR KEGVVGKFVE FYGPGLNSLS
LPDRATISNM APEYGATLGI FPPDAETLDY LRRTGRSKEQ VDLVKKYMEA QGLFYSTHDP
DPVFSTTLEL DMSTVKPCLA GPKRPQDQLF LSEVPENYHE IMKQTFIRKK ESGLELSQDP
AYQRWIEDGG TPFEEPETPG AEEEIKESSE KSFRVTHGSV VIAAITSCTN TSNPSVLIGA
GLLAKRAVEK GLHVKPFVKT SLSPGSRVAT EYLKAAGLLP YLEALGFHQV GYGCTTCIGN
SGPLPEKVSK EIKENDLTVA AVLSGNRNFE GRINPLVRAN YLASPPLVVA YAIAGTVNIN
LETDPLAYDP NGRPVYLKDI WPAEKEIRAA EKNSIKPSMF EKEYSGALEG SKRWKELEAP
TGTLYDWNSM STYIQEPPYF MDFPPAPPSP ADIKNARVLA LFGDSITTDH ISPAGAIPSD
SPAGRYLISW GVSPEDFNSY GSRRGNHEVM MRGTFGNIRL RNRLVGREGG WTVYHSRKED
FPEEPCEGIP IYDAAMLYAE NDTPLIVIAG KEYGTGSSRD WAAKGTFLLG VKAVIAESFE
RIHRSNLVGM GVLPLQFKEG ENADTLGLTG KESYDILGIE YMEPQGELTV RAKDEDGNEV
QFQVTLRLDS AVEVEYYLNG GILHKFLRDS VKKN