Gene Mbar_A0709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0709 
Symbol 
ID3625776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp848356 
End bp849243 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content41% 
IMG OID637699601 
Producthypothetical protein 
Protein accessionYP_304267 
Protein GI73668252 
COG category[S] Function unknown 
COG ID[COG3389] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.229497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTTCCA TCGAACAATC AATTAAAGAT TATTTCCCCA TTATTTCCAT GGGAGGACTA 
ATCCTTATAG TGCAGATTCT TGCACTCTTT TTGTCCACAC CAATGGAAGT TAGTGGAATG
CAGGCTTTTG AGGACCCAAC CCAGGTGTCT AATTCTATAT ATTATATTAT AATGATCCTG
GTTTTTACCC TGTTTGTCCT TATAGCAATA AAGAAAAATA TGAAGTGGGT AATCAGCCTC
TTTATTTATC TGGCCATAAT AAGCACTATC TATTACGTAG TCCTCGCCCT GTTTACCCTT
ATTCCGTCTC TTTCAGGATT TGAGTCCATT GCCTCAATTG TGCTATCCAT AGGAATAACA
GTGCTGCTCT ATAAATATCC AGAATGGTAC ATAGTTGACA TTGTGGGAGT TTGTATTGCA
GCCGGGGTCA GTGCTCTGAT AGGAATTTCC CTCTCAGTTG TCCCCGTAAT AATACTTCTG
CTGCTTCTTG CAATATACGA CGCTATATCG GTGTACAAAA CAAAGCATAT GGTAACGATG
GCTGAAGGGA TAATGGATCT GAAGCTTCCA ATCATGTTTG TAATTCCAAA AAACCTGAAA
TATTCTTTCT TGAAGGAAGA CTTCAAAAAG GAAGGAAAGC ACGAGGCCTT TTTTATGGGG
CTTGGAGATG CGGTTATGCC TACTCTGTTG GTAGTATCAG CAAATGTCTT CATGAAAAGT
AATTTCTATC CAGTCACTGG GGCCATACTG GGCACGCTTC TAGGTCACGC AATCCTTTCC
ATTCAGGTAA TGAAAGGAAA TCCACAGGCA GGTCTTCCCT TTTTGAATTC CGGAGTAATC
CTGGGGTTCT TTGCTGGTGT CCTGATCTCA GGGGCTTCAT TTTTGTGA
 
Protein sequence
MSSIEQSIKD YFPIISMGGL ILIVQILALF LSTPMEVSGM QAFEDPTQVS NSIYYIIMIL 
VFTLFVLIAI KKNMKWVISL FIYLAIISTI YYVVLALFTL IPSLSGFESI ASIVLSIGIT
VLLYKYPEWY IVDIVGVCIA AGVSALIGIS LSVVPVIILL LLLAIYDAIS VYKTKHMVTM
AEGIMDLKLP IMFVIPKNLK YSFLKEDFKK EGKHEAFFMG LGDAVMPTLL VVSANVFMKS
NFYPVTGAIL GTLLGHAILS IQVMKGNPQA GLPFLNSGVI LGFFAGVLIS GASFL