Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0709 |
Symbol | |
ID | 3625776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 848356 |
End bp | 849243 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637699601 |
Product | hypothetical protein |
Protein accession | YP_304267 |
Protein GI | 73668252 |
COG category | [S] Function unknown |
COG ID | [COG3389] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.229497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTTCCA TCGAACAATC AATTAAAGAT TATTTCCCCA TTATTTCCAT GGGAGGACTA ATCCTTATAG TGCAGATTCT TGCACTCTTT TTGTCCACAC CAATGGAAGT TAGTGGAATG CAGGCTTTTG AGGACCCAAC CCAGGTGTCT AATTCTATAT ATTATATTAT AATGATCCTG GTTTTTACCC TGTTTGTCCT TATAGCAATA AAGAAAAATA TGAAGTGGGT AATCAGCCTC TTTATTTATC TGGCCATAAT AAGCACTATC TATTACGTAG TCCTCGCCCT GTTTACCCTT ATTCCGTCTC TTTCAGGATT TGAGTCCATT GCCTCAATTG TGCTATCCAT AGGAATAACA GTGCTGCTCT ATAAATATCC AGAATGGTAC ATAGTTGACA TTGTGGGAGT TTGTATTGCA GCCGGGGTCA GTGCTCTGAT AGGAATTTCC CTCTCAGTTG TCCCCGTAAT AATACTTCTG CTGCTTCTTG CAATATACGA CGCTATATCG GTGTACAAAA CAAAGCATAT GGTAACGATG GCTGAAGGGA TAATGGATCT GAAGCTTCCA ATCATGTTTG TAATTCCAAA AAACCTGAAA TATTCTTTCT TGAAGGAAGA CTTCAAAAAG GAAGGAAAGC ACGAGGCCTT TTTTATGGGG CTTGGAGATG CGGTTATGCC TACTCTGTTG GTAGTATCAG CAAATGTCTT CATGAAAAGT AATTTCTATC CAGTCACTGG GGCCATACTG GGCACGCTTC TAGGTCACGC AATCCTTTCC ATTCAGGTAA TGAAAGGAAA TCCACAGGCA GGTCTTCCCT TTTTGAATTC CGGAGTAATC CTGGGGTTCT TTGCTGGTGT CCTGATCTCA GGGGCTTCAT TTTTGTGA
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Protein sequence | MSSIEQSIKD YFPIISMGGL ILIVQILALF LSTPMEVSGM QAFEDPTQVS NSIYYIIMIL VFTLFVLIAI KKNMKWVISL FIYLAIISTI YYVVLALFTL IPSLSGFESI ASIVLSIGIT VLLYKYPEWY IVDIVGVCIA AGVSALIGIS LSVVPVIILL LLLAIYDAIS VYKTKHMVTM AEGIMDLKLP IMFVIPKNLK YSFLKEDFKK EGKHEAFFMG LGDAVMPTLL VVSANVFMKS NFYPVTGAIL GTLLGHAILS IQVMKGNPQA GLPFLNSGVI LGFFAGVLIS GASFL
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