Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0703 |
Symbol | |
ID | 3625770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 841388 |
End bp | 842635 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637699595 |
Product | hypothetical protein |
Protein accession | YP_304261 |
Protein GI | 73668246 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1924] Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) |
TIGRFAM ID | [TIGR00241] CoA-substrate-specific enzyme activase, putative [TIGR03286] putative methanogenesis marker protein 15 |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.631439 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATG AAGAGTCGGG ACTTGTTAAG ATTGCACTGG TATCCTGTGG CTCTGAGTAT GCTGGAGTTC AGCCTGAGTT TGAAGAAGCA GCAGCTAAAG TGAATGCAAA ATTTATTTAT CCTGAAATTG ATGTTTCATC TGTAGATACT ATAGGCAGAG AGTTCGGGCT TGAGGTTGCG AGTGGAGACC TGAGGCTTAT GATGGCTCGG GCAAAAGCTG TTGTTGAAGG TATAACCAAT GCGGACGGAG TTTTCATTAC TACCTGTTTC CGCTGTGCCG AAGGAGCTAT TGTACGAAAT GAGGTCAGAA GATATATCCA TGAACATTCC AATATTCCGG TAATCAGCTA TTCTTTTACC GAAAGCACCA GTGCGGGTAC GCTTCTTACT CGTCTGGAAG CTCTTACTAC AATTGTCAGA CGCAGGCACC TTCTTACAAG GGAAGTTCAG ACAGGGCTGA CCGCGGGAAT AGATTCAGGG TCAACAACAA CAAAAGCCGT GATAATGAGG GACAACAAAA TAATAGGCAT GGGCTGGGTG CCCACAACAA AAGTCCTTGA AAGTGCTGAA GAAGCTTACT CTATTGCCCT GAAAGAGGCT GGTGTTTCCA GGGAAGAAAT TCAGGCTCTG GGTACGACCG GATATGGGCG ATTTCTTATA GGTACTCATT TTAAAGCTCA ACTTATTCAG GAAGAAATTA CTGTTAACTC AAAAGGAGCC GTCTACCTTG CTGATAAGCA GAAAGGCAAT GCAACAGTTA TTGATATAGG CGGTATGGAC AACAAGGCAA TCTCGGTTCA GGACGGAATT CCCGGAATGT TTACAATGGG TGGGATTTGC GCAGGTGCTT CCGGACGTTT CTTTGAGATG ATCTCAAAGC GGCTTGGTGT AGATATCACT GAACTGGGAG CTCTGGCAGT TAAAGGGATG CATGAACATG TATCTATGAA CAGCTACTGC ATAGTTTTCG GAACTCAATC CCTTGTAAAT TCCCTTGCAA GAGGAGCCAC TCCTGAGGAT GTGGCTGCTG CAGCCTGCTA TAGTGTGGTA GAACAGATCT ATGAGCAGCA GTTACAGGAA GTAGATGTTA AAGAGCCACT TATTCTTGTG GGTGGATCTT CCCTAATTGC AGGAGTACCA AAAGCCCTCG GAGAACTTCT AAAGATCGAT GTCCTTGTGC CTGAGAACTC ACACCTTATA GGAGCAGTAG GAGCAGCTTT GCTTGCCTCG GGCTTTGTGG AGGAGTGA
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Protein sequence | MSDEESGLVK IALVSCGSEY AGVQPEFEEA AAKVNAKFIY PEIDVSSVDT IGREFGLEVA SGDLRLMMAR AKAVVEGITN ADGVFITTCF RCAEGAIVRN EVRRYIHEHS NIPVISYSFT ESTSAGTLLT RLEALTTIVR RRHLLTREVQ TGLTAGIDSG STTTKAVIMR DNKIIGMGWV PTTKVLESAE EAYSIALKEA GVSREEIQAL GTTGYGRFLI GTHFKAQLIQ EEITVNSKGA VYLADKQKGN ATVIDIGGMD NKAISVQDGI PGMFTMGGIC AGASGRFFEM ISKRLGVDIT ELGALAVKGM HEHVSMNSYC IVFGTQSLVN SLARGATPED VAAAACYSVV EQIYEQQLQE VDVKEPLILV GGSSLIAGVP KALGELLKID VLVPENSHLI GAVGAALLAS GFVEE
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