Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0681 |
Symbol | |
ID | 3625634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 814521 |
End bp | 815189 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637699574 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_304240 |
Protein GI | 73668225 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.614663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTGAAG TTATTGATGT CAAAAAGAGC TATACTCTTG GAGATCTGGA GATTCCAATC CTTCATGATA TAAACCTTAA AGTGCGGGAG GGAGAATTCC TTGCCATAAT GGGGCCCTCT GGCTCAGGGA AGAGCACACT TATGAATCTT ATAGGTTTTC TTGATAGACC TACAGAAGGG ACAATCATAA TTAAAGGTCT GGATATCAAT AAACTATCTG ACAAGGAAGT TGCCAGGCTC AGAGGGTTAG AAATTGGTTT TATTTTTCAG ACATTCAATC TGATTCCCAG GCTTACAGCT CTTGAAAATG TTGAGCTTCC CACCTATGCT AACACAAGGA GTGGAGTCAA TACTCATGAA AGAGCAAAGG GATTACTTAA ACTCGTGGGT CTGGAGGATC GAATGCACCA CAAGCCCGGT GAGCTTTCAG GTGGTCAATC CCAGAGAGTT GCTATTGCCA GAGCTCTTAT CAATGACCCT GCGATCCTCC TTGCAGATGA GCCCACTGGA AATCTGGACT CGAAGACAGG CTGTGAAATT CTAAATATAT TTAGAAGACT CAACGACGAC GGAAGAACAA TTGTAATGAT TACTCATGAT CCGGAAATTG CAGGATATGC AGACAGGATA GTGCTCGTAA AGGATGGGAT AGTTCAGAAT ACGGAATGA
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Protein sequence | MIEVIDVKKS YTLGDLEIPI LHDINLKVRE GEFLAIMGPS GSGKSTLMNL IGFLDRPTEG TIIIKGLDIN KLSDKEVARL RGLEIGFIFQ TFNLIPRLTA LENVELPTYA NTRSGVNTHE RAKGLLKLVG LEDRMHHKPG ELSGGQSQRV AIARALINDP AILLADEPTG NLDSKTGCEI LNIFRRLNDD GRTIVMITHD PEIAGYADRI VLVKDGIVQN TE
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