Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0663 |
Symbol | |
ID | 3627799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 787221 |
End bp | 787964 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637699555 |
Product | glutamate synthase (NADPH) GltB3 subunit |
Protein accession | YP_304222 |
Protein GI | 73668207 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0070] Glutamate synthase domain 3 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.358325 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGACGG TAAAAATTGA TGCCAGAGGT ATGCACTACA CCCCCTTAAA CCAGAAAATC AGGGCTGCGG TTGCGGATGG AGCAGAGGAA ATCATACTCG ACAATATACT CGGGCAGCGC TTTATAGGAG ATGGGCTTAG AGGCAATGTC CGCATCATAG TCAATGGGGT TCCAGGAGGA GATCTGGGAA TGTTCATGAG CGGGCCGACC TGTATTGTAC ATGGGAATGC CGAACATGCT CCGGGCAACA CAATGGATAA AGGAATGCTC GTGATTCATG GAAGTGCAGG AGATGCAGTT GCCCACAGCA TGCGAGGAGG AAAAGTCTTT ATAAAGAATA ATATTGGCTA CCGTGGCGGC ATCCACATGA AACAGTACGA CGTGGAAGCC AGACCTATTC TTGTTGTAGG TGGCACAGCC CACTCCTTCC TCGGAGAGTA TATGGCAGGT GGCCTGGTGC TCGTGCTTGG TATTGGCAAG GATAAAGCCA TGACAGATAG GGGTATCGGA AGCGGAATCC ACGGTGGAGA AATTATTCTC CGTGGGGAAG TGGACGATTT CTTACTTGGA GTAGGAGCCA AGAAATTCAA GTTTACCGAA AGTGATCTTG AACGTATTGC CCCAACTATA AAGAATTTCT GCGAGCAGTT CGGATATGAT CCTGCGGAGT TCCTGGACAC CAACTACACA AAGATCGGAC CTGCAAGCAG CCGGCCTTTC GCAAGCAAAT ATGTATGGGA GTGA
|
Protein sequence | MKTVKIDARG MHYTPLNQKI RAAVADGAEE IILDNILGQR FIGDGLRGNV RIIVNGVPGG DLGMFMSGPT CIVHGNAEHA PGNTMDKGML VIHGSAGDAV AHSMRGGKVF IKNNIGYRGG IHMKQYDVEA RPILVVGGTA HSFLGEYMAG GLVLVLGIGK DKAMTDRGIG SGIHGGEIIL RGEVDDFLLG VGAKKFKFTE SDLERIAPTI KNFCEQFGYD PAEFLDTNYT KIGPASSRPF ASKYVWE
|
| |