| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0644 |
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| Symbol | |
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| ID | 3627498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 764660 |
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| End bp | 765604 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637699536 |
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| Product | oligopeptide ABC transporter, permease protein |
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| Protein accession | YP_304203 |
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| Protein GI | 73668188 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGGT ATTTACTAAA ACGATTTGCA TCCATGCTGA TCACACTTGT TGTGGCGTGT
GCACTGACAT TTTTCTTGAT GCATATGATA CCTGGAGAAA CTACAGAGAT AATTCTCAAA
CATACTTTTA TAGGTCTTGA AGAAACAGCT ACAGAAGAGC AATTGATGCA ATTTTCAGAA
AAATATAACC TCAATGACCC TCTATACATT CAGTTTTTCG AATGGTTGAA AAACTTTCTG
TTAAACGGTG ACATCGGTAC TTCTTATGTA TATCATAAAC CTGTGATATA TCTTCTGAAA
CTGCGTCTGC CGGCAACAAT CCTTCTGGCG ACATCAAGTA TGTTGATAAC TGTTGTTTTA
GGTATAAGCC TGGGAGTGTA TTCTGCCTTG AAACAGAATA AGTTGTCAGA TCATATTCTC
AGGTTTATCA GCCTTTTTGG AGTTTCGATG CCAGGATTCT GGATCGGCCT GCTTCTTATC
CTTCTCTTCT CAGTCAAGCT CAAACTGATA CCTGCAACGG ATTATGGTAG TCTGGAGAAT
CTCTTCCTGC CAGCCCTTGC GCTCTCATCA CATTCGATAG CATCGGTGAT GAGGATTACA
CGAACAAGCA TGCTTGAGAC ACTTGGTCAG GATTACATCA AATTTGCCGT AGCTAAGGGA
CTTTCTACAA GAACTATAGT CTTAAGGCAT GCGATGAAAA ATGCTCTGCT ACCAGTGATA
ACAGTTCTTG GCTTTCAGAT GGGGCATTTG CTTGGTGGTT CCATTGTTAT AGAACAGGTA
TTTACATGGC CTGGAATAGG CAGTCTCCTT GTCAATTCGA TATCTGCTCG TGACATTCCT
GTTGTGCAGG GTTGCGTAAT GTGTATAGTG GCAATGTTTC TTATGATAAA TTTCCTGGTG
GATATCTTCT ATACGTATCT GGATGCAAGA ATAAAATATG ATTAA
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| Protein sequence | MHRYLLKRFA SMLITLVVAC ALTFFLMHMI PGETTEIILK HTFIGLEETA TEEQLMQFSE
KYNLNDPLYI QFFEWLKNFL LNGDIGTSYV YHKPVIYLLK LRLPATILLA TSSMLITVVL
GISLGVYSAL KQNKLSDHIL RFISLFGVSM PGFWIGLLLI LLFSVKLKLI PATDYGSLEN
LFLPALALSS HSIASVMRIT RTSMLETLGQ DYIKFAVAKG LSTRTIVLRH AMKNALLPVI
TVLGFQMGHL LGGSIVIEQV FTWPGIGSLL VNSISARDIP VVQGCVMCIV AMFLMINFLV
DIFYTYLDAR IKYD
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