| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0643 |
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| Symbol | |
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| ID | 3627497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 763772 |
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| End bp | 764650 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637699535 |
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| Product | oligopeptide ABC transporter, permease protein |
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| Protein accession | YP_304202 |
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| Protein GI | 73668187 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA ATATAAAAAT TCCTGACAGC ATCATCAGTG AAGAACACAT ACAGATGATC
TTCAGGAGAA AGGACATGCT GATTGCCCTT ATCCTTCTTT TTTCTCTAAT GTCAATATCC
CTAATTGCTC CATGGATCGT CCCATCTGAT CCCAATGAGG CAAATCTTAC AAACAAAAAT
CTTGGTCCTT CATCAGAACA CTTACTTGGC ACCGACTATC TAGGACGTGA TATGTTGAGC
CGAATAATGA TTGGGGCCCA TACATCCCTA TTGATATCAT TTGGTGTTGT TTTGATATCT
CTTGTGTCTG GCGTTTTTCT GGGATGCATG GCAGGTTACT ATGAAGGCTA TGTGGATGAG
GTGATCTCGA GACTTATAGA CATATTCCTT GCATTTCCGG GGATTATTTT TGTCCTGACA
GTAATGAGTA TGCTTGGCAC TGGTGTCATG AATATCATAA TTGCGCTTTC AATTGTTCAG
TGGGCAGGTT ACGCCCGACT GATGCGGGGA CAGGTAATTT CAGTTAAAAA GAACGAATAT
GTGCTTTCAG CAAAGATGAT AGGTGTAGGA GATCTCAGGG TACTATTAAG GCACATCGTT
CCCAATTCTA TAGCTCCCAT CCTTGTCCTT GCGACAATTG ACATTGGGCA TGTCATTCTC
TCCATATCTG CCCTGAGTTT TTTGGGTATT GGGCTTCCTG CCGATATCCC CGAATGGGGT
GCCATGCTGA GTGCAGGAAA AGCCTATATG AGGACAGCGC CGTTCCAGAC AATTTTCCCT
GGAATGGCGA TAACGACTTT TGTGGTTATT TTCAGCATAC TTGGCGATGG AATGCGAGAT
ATTCTGGATC CTCAGGACAA AGGTGGTGAT ATGTATTGA
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| Protein sequence | MMKNIKIPDS IISEEHIQMI FRRKDMLIAL ILLFSLMSIS LIAPWIVPSD PNEANLTNKN
LGPSSEHLLG TDYLGRDMLS RIMIGAHTSL LISFGVVLIS LVSGVFLGCM AGYYEGYVDE
VISRLIDIFL AFPGIIFVLT VMSMLGTGVM NIIIALSIVQ WAGYARLMRG QVISVKKNEY
VLSAKMIGVG DLRVLLRHIV PNSIAPILVL ATIDIGHVIL SISALSFLGI GLPADIPEWG
AMLSAGKAYM RTAPFQTIFP GMAITTFVVI FSILGDGMRD ILDPQDKGGD MY
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