Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0607 |
Symbol | |
ID | 3627667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 729498 |
End bp | 731333 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637699500 |
Product | hypothetical protein |
Protein accession | YP_304167 |
Protein GI | 73668152 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTATATTT GGAAAGATAT TAGAGATATC ATCGGAAATC CTTTTGATTT CAGCAAATTT GTATCCAGTC CAAATTACAC TGAGCATATC TCTTTCATAG AGCACTTCCA TTCTGATTTT GATAGGATAC TTAAATCCTA TGTTGGAAAT TCAAGGGTTT ATGTATTTGT AGATGACCTT GACCGTTGTG AAGTTCCAAA AGCTGCGGAA CTTATGCAAG CTCTAAACCT CATGCTCTCG GATAAAGCAA ATGTTTATTT TTCCATAGGT ATAGACCGCA AAGTCATCTC TGCGGGACTT GCAGCTAAAA ACGGAAAAAT CCTTAGGCAT TTGGAGGTCA ATGGACTTGA ATACGGTTAT GATTACATTG AAAAATTTAT CCAGCTCCCT TTTAAAGTTC CCAGTCCAAA AACTGAGGAT TTCAAGAAAT TTATGAGCCC TCAACCTGAA AAGAAAAATT CCTGGTTATA TAATAATTCA TTGAGTAAAA AGTTTAAGAA ATTTTTCAGT ATATTTAAGG TTAATCACCT AAGTTCACAG CATGATAAAG ACAGCACTCA GCCGGAAAGT TCTGAAAGTG GCAAACATAG AGAAGATGTT CTCAGAAATG CTGCAAATGA TGAACCGGAA ATAGAGGGGA AGATCACGAA TGATATGGAC TGTGATGAGA AATTAGTGGA GCTGGATCAC ATTCTAGAAA TGATTGCTCC AGCTCTTGAT AGAAACCCCC GCCGTATGAA ACAGTTCATT AATCAGTTTC GTTTCCAGAG AACTATAGGA AAAAGAATAG GTCTCTTTTC CTATGATAAG GGCAGTGCTC CTGAAAATAT GTGGAACTGC AAAAAACTTG CAAAATTCGT GGCAATAAGC ATAAAGTGGA ACTCAATCAT TTCTGCTCTG AATTCAAACA GAGCGCTTCT TACCCGCTTG CAGGAATATG CATTGAAGCC GGAAAATGAA GATAAAAATC TGGAGAAATG GGTTCGGGAC AAAAGGCTGA TCGAATTGTT GAGGTACGGC TGCATAGAAG AAGGTAATCT CTCGCAAAAT GCAGCCGAAT ACACGTTATC AGGCCTTGAT CTCAGCAAGT TATTGCAGGT TTCACCCGTC ATTGTATATC CAGAACAAAG TACATCCGGG TTTTCATCGA TTGGTATAGA TGAAATGGAG TTTGTTCGAA TCCCAGCAGG AGAATTTATG ATGGGCTCGC CTTCCTACGA GAAAGGCGGA TATAATGATG AAGCTCCGAT CCATAAAGTA ACAATCAAAG ATCCTTTCGA TCTTGGTAAA TATCCTGTTA CTCAAAAACA GTGGATTGAT GTAATGGGCT ACAACCCTTC CTATTTCAAA GGTGATGATC TGCCTGTAGA ATCTGTTTCT TGGGAGGATA TTCAGGAATT TATCAAAAAA CTCAATGATC GAGAAGACAC GGACAAATAC ATCTTACCCT CTGAAGCCGA GTGGGAATAT GCGTGCCGTG CAGGTACTAC CACAAGATAT TCCTTTGGTG CTGAAGAGTC AAAACTTAAT GAATATGCGT GGTACAACAA AAATTCAGGT TTCAAAACTC ATCCAGTCGG TCAGAAGAAT CCAAATCACT GGAACATTTA CGACATGCAC GGTAATGTTT GGGAATTGGT CCAAGACAAA TGGCATGATA ATTATGAAGA TTCTCCTTCC GATGGTAGTG CTTGGAAAGA TGAAAGTGTG TCTTCCCATG TTCTTCGGGG TGGCGGATAT AAAAGCGATG CTGGGGACTG CAGGTCAGCG GCACGCGGCA GGTATGTCTC CCTCCATGAC AGCAGCTTTG GTTTCCGTCT TCTGAGGAAA TTGTAA
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Protein sequence | MYIWKDIRDI IGNPFDFSKF VSSPNYTEHI SFIEHFHSDF DRILKSYVGN SRVYVFVDDL DRCEVPKAAE LMQALNLMLS DKANVYFSIG IDRKVISAGL AAKNGKILRH LEVNGLEYGY DYIEKFIQLP FKVPSPKTED FKKFMSPQPE KKNSWLYNNS LSKKFKKFFS IFKVNHLSSQ HDKDSTQPES SESGKHREDV LRNAANDEPE IEGKITNDMD CDEKLVELDH ILEMIAPALD RNPRRMKQFI NQFRFQRTIG KRIGLFSYDK GSAPENMWNC KKLAKFVAIS IKWNSIISAL NSNRALLTRL QEYALKPENE DKNLEKWVRD KRLIELLRYG CIEEGNLSQN AAEYTLSGLD LSKLLQVSPV IVYPEQSTSG FSSIGIDEME FVRIPAGEFM MGSPSYEKGG YNDEAPIHKV TIKDPFDLGK YPVTQKQWID VMGYNPSYFK GDDLPVESVS WEDIQEFIKK LNDREDTDKY ILPSEAEWEY ACRAGTTTRY SFGAEESKLN EYAWYNKNSG FKTHPVGQKN PNHWNIYDMH GNVWELVQDK WHDNYEDSPS DGSAWKDESV SSHVLRGGGY KSDAGDCRSA ARGRYVSLHD SSFGFRLLRK L
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