| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0560 |
|---|
| Symbol | |
|---|
| ID | 3626346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 670274 |
|---|
| End bp | 671371 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637699452 |
|---|
| Product | DNA polymerase IV |
|---|
| Protein accession | YP_304121 |
|---|
| Protein GI | 73668106 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGTA TCATTCTCCA TGTAGATATG GACTCTTTTT ATGCAGCCAT TGAAGAGCGG
GAAAACCCTG AACTTCAGGG AAAAGCCGTC GTGGTCTGCA TGCTTTCCGG AAGAAGCGAG
CTCAGTGGGG CTGTAAGTAC CTGTAATTAT ACCGCACGAG AGTCCGGGAT CAAGGCAGGC
ATGTCATGTT CGAAGGCAAA GAAACTGAAC CCTGAAGCAG TTTTCCTGCC TGTACGAAAG
GATTTCTATA CTTCGGTCTC GGACCGGGTT ATGGAAATTC TCAGGAGTTA TGCGGATGCC
AGGGAGATAG GGGAAGCGTT TGAACAGATA AGCATAGACG AAGCCTTCCT GGAAATTACT
GAAAAAACAG GTGGGGATTT TAACCTTGCC TTTGAGATTG GAACCCAGAT CAAGAATGAA
GTAAAGGATA AAGAGAAGCT GACATGTTCA GTAGGGGTAG GCCCAAATAA GCTTATTGCC
AAGATGGCAT CCTCTGTCCA GAAACCCGAT GGGATTACTG TTATAAGTCC GGATAAATTT
GAGAGCTTTC TCTGGCCTCT CAAGGTATCT AAACTCTGGG GAATAGGGAA TGTAACCGCA
GGAAAACTGC AGGAAATGGG CATAGTCACA ATAAAAGATC TTGCTGAACA CGACGTTATT
GACCTGATCT CAACTTTCGG AAAAACGCGG GGAGTCTGGC TTAAACAGGC TGCATCAGGC
ATCGATGATT CCCCTCTGAA AGAAAAGGAC GGCTCAGAAC AGATAGGAAG GATCGCAACT
CTGCCTGAGG ATACTCTCGA CGTTAATCTT ATCTCTCAGC TACTTGACAG GCTGGCAGGG
GATGTAATTT CAAAACTCGA TTCAAGGGAG CTTTCCTTCA GGACTGTAAC TATTACGGTC
ATAAATTCAA AGTTCAGGAT GTACACTAAA AGCCGTACAC TAAACCACCC GGCCTATTCA
AAGGAAACTC TTCTCGAGGT GACTCGCGAA ATCCTTAATG AGTTCCTTTC AGAAAGCCGG
ACTGAGTTCA GGCGTGTAGG TGTCAGGGTA GGAGAACTTC AAAAAAGAAT GGGCCAGAAA
AGCCTTTTTG ATTATTGA
|
|---|
| Protein sequence | MQRIILHVDM DSFYAAIEER ENPELQGKAV VVCMLSGRSE LSGAVSTCNY TARESGIKAG
MSCSKAKKLN PEAVFLPVRK DFYTSVSDRV MEILRSYADA REIGEAFEQI SIDEAFLEIT
EKTGGDFNLA FEIGTQIKNE VKDKEKLTCS VGVGPNKLIA KMASSVQKPD GITVISPDKF
ESFLWPLKVS KLWGIGNVTA GKLQEMGIVT IKDLAEHDVI DLISTFGKTR GVWLKQAASG
IDDSPLKEKD GSEQIGRIAT LPEDTLDVNL ISQLLDRLAG DVISKLDSRE LSFRTVTITV
INSKFRMYTK SRTLNHPAYS KETLLEVTRE ILNEFLSESR TEFRRVGVRV GELQKRMGQK
SLFDY
|
|---|
| |