Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0559 |
Symbol | |
ID | 3626345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 668238 |
End bp | 670142 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637699451 |
Product | hypothetical protein |
Protein accession | YP_304120 |
Protein GI | 73668105 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes [COG1370] Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit [COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits |
TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGAC CAGCATATCT TGGAAAAATG CTTCTGCACT GGTGTGAGGC CTGTAATGTG CCTGTGCTAG GTAAACGGTG CGGATGCGGC AAAAATACAA AAAAAGTTGA GGTAACCCCT CCAGGGGATA TCCGTCCTGC TTTTGATTAT GATATAAAAC GCATAAACTC GGTTTCGGAA AAACAGTTCA ATGCGCCACT TATACCTGAA GGACACCTCG TAGTGCTAAA TAAAGCTCCG TATGAAGACC GTATGGATGA GATTATAGTT GACGGGGAAG TGCTTGCGTC TCTCAGATTT GAAATAGAGA GCTGTGAATG GGTCCTGCTT CCAAGGCTCG AAGGAGCGAG AAGGCTTTTC CAGGGCAGAG ATAGAAAAGC CCTGAAAAAA TGGGTTGTTA TCGAGCAGGC AGTTGTACCT TTTATCCTGG AAAAAGGAGC AAGTGTTCTG GCTCCCGGGG TTCTCGATGC CGATCCTGAA ATCAAAAAAG AAGATGAGGT AGTTGTACTG AACCCCGCAG GGGAAGTAAT CTGCTGTGGG CGAGCCCGAA TGACAGGAAA GGAAATGTAT GAAGAAAACC ACGGGCATGC AGTAAAACCG CGCTGGAGCA AAGACCCAGA GCCTCAAAAA ACAAAACTTG GAGGACAGAC CTGGGAAGAT GCCGTAAAAG CCAACGAAAA AATTCTGGAC GGCATGATAG AAAGGTCCCA TGCCTTCATA AAAAATGTAG CAAGAAGCAT GGAACTGAAA GTAAGCGTAT CCTATTCCGG GGGGAAGGAT AGCCTTGCTG TGCTCCAGCT AGTTGATGAG AGTCTTGACG ATTACGAAAT TATGTTTGCA GATACCGGGC TTGAGTTTCC GGAAACCGTT GAAAACGTCA AACAGGTTGT AGAACACTAC GGGAAAAAAC TCAGGACATC AAGCGCAGAA GACGCTTTCT GGGACTCGAT AAGTGTTTTT GGCCCTCCTA CAATGGATAC TCGCTGGTGC TGCAAGATTT GCAAACTCGG GCCAATTACC CGGTTAATTG ACGAGAACTA CGAAGGCGGA TGTCTTAGTT TCATAGGACA GCGTCAGTAT GAATCCCACG CCCGTTCAAT CAGCAAGAAA GTCTGGAAAA ATCCCTGGGT GGGAAACCAG GTTGGAGCAT CCCCTATACA GGAATGGACA GCTCTTCATG TTTGGCTTTA CCTTTTCAGG ACAAAAGCTC CCTATAATCC GGCTTATGAA AAAGGATATG ACAGGATGGG ATGCTGGCTC TGCCCATCTT CCTCTCTTGC AGATTTCTTT CAGCTTGAAG AAAGCCATCC AGACCTTGCA AAAAAGCTGA ACTCCCATCT CCTTGCCTAT GCCGAGAAAA TGGGGTTTTC TCCTGAGTGG GTAAAGTACG GTTTATGGCG CTACAAGCAG TATCCTCGGG TTCTCCAGAA CCTTGCTGAG AAAAAAGGAA TTTCTCTTAT TCCATCCCAA GAAGCTCCAA CAGAACTTCA TTTTGAAGTC GCAACAGGGT ACAGGCCCTG CAAAGCAGGA GGAATATCTG CGGACGGAAG CTTCGGGCAG GCAATTGACA TAGAAACTCT GAAAGAAAGC GGAATGCTTT CACCCGTCGG AAAGGCTTCT TTCATAGAAG GGGCTGCGTC AGTCGTTTTC AGAGAATCCA GAGCACAGGT TTTTGCTTCA GGGAATGTTA ATGGGAGAAG CGAGAACGAA AAAGAGCTAA AAAAGCTTAT GAGAATTGTT GAGCTCTCAG TAAGAAGGGC TTTAATCTGC CAGGGGTGTG GAGTTTGCGT GGGCCACTGT GAGCATAATG CGATTGAAAT GAAAGAAAAG AAAGTAAGAA TTAAAGAAAA CTGCATTCAC TGCGGAGCAT GTATCGAAGT CTGCCCGCTT GTTAAGTTTA TTTGA
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Protein sequence | MSRPAYLGKM LLHWCEACNV PVLGKRCGCG KNTKKVEVTP PGDIRPAFDY DIKRINSVSE KQFNAPLIPE GHLVVLNKAP YEDRMDEIIV DGEVLASLRF EIESCEWVLL PRLEGARRLF QGRDRKALKK WVVIEQAVVP FILEKGASVL APGVLDADPE IKKEDEVVVL NPAGEVICCG RARMTGKEMY EENHGHAVKP RWSKDPEPQK TKLGGQTWED AVKANEKILD GMIERSHAFI KNVARSMELK VSVSYSGGKD SLAVLQLVDE SLDDYEIMFA DTGLEFPETV ENVKQVVEHY GKKLRTSSAE DAFWDSISVF GPPTMDTRWC CKICKLGPIT RLIDENYEGG CLSFIGQRQY ESHARSISKK VWKNPWVGNQ VGASPIQEWT ALHVWLYLFR TKAPYNPAYE KGYDRMGCWL CPSSSLADFF QLEESHPDLA KKLNSHLLAY AEKMGFSPEW VKYGLWRYKQ YPRVLQNLAE KKGISLIPSQ EAPTELHFEV ATGYRPCKAG GISADGSFGQ AIDIETLKES GMLSPVGKAS FIEGAASVVF RESRAQVFAS GNVNGRSENE KELKKLMRIV ELSVRRALIC QGCGVCVGHC EHNAIEMKEK KVRIKENCIH CGACIEVCPL VKFI
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