Gene Mbar_A0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0546 
Symbol 
ID3626332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp654948 
End bp656465 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content36% 
IMG OID637699438 
ProductWD repeat-containing protein 
Protein accessionYP_304107 
Protein GI73668092 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTT TGAGAGGTCA CGAGAAGGTA TTCTCAATTG CAGTAACTCC GAATGGAAAA 
TATGCTGTTT CAGGTTCACA CGATGGAACT CTTAAGGTGT GGGATTTAGA AAAATGGAGA
GAAATAAGAA GTTTAAGAGC GCATTCAAAA TCAATAACTG CTTTTGCGAT AACTTCTGAT
GGAAAACTTG TCGTTTTGGG TTCACTTGAT GGAAACCTAG AGGTTTGGAA TTTGGAGACA
GGAGAAGAAA AAGCAGCTTT CAAAGAGCAT TCAGAGCCAA TAACTGAAAT TGTAATCACA
CCTGACGGCA AGCGTGCCGT TTCAGGCTCA TCTGATAACA CCTTAAAAGT TTGGGATCTG
GAGAAAATGG AAGAACTTAC GACTTTAATA AGCCACTCAA ACTCAGTAAG TAAAATCGCA
ATCACCCCTA GTGGAAAATA TGCTATATCA GGTTCATCTG ATAACACTTT AAAAGTCTGG
GATTTGAAAA AATTAGATGA AGAAACAATA TCTACAGGAC ATTCAAAGTC AGTAAATAAA
ATCGTAATCA CTCCTGATGG CAAACTTGCC GTTTCTAGTT CATATGATGG AACTCTAAAG
GTTTGGGACT TGAAAACAAA AGAAGAAAAA GTAACTTTAA AAGGGCACTC TGGGCCAGTA
ACTGATTTTG TGATAACTCC TGATGGGAAG CGTATTATTT CAGGTTCAAG TGATAAAACC
TTAAGGGTTT GGGACTTGAA AAAAGGAAAC ATGACTTTAA AAGGCCACAA GCGTGAAGTG
ACTTCAGTAG CAATTACTTC TGATGGAAAA TATGCCATCT CAGGCTCATT TGATAGAACA
ATTAAAGTAT GGGACTTGGA AAACGGAAAA ATAAAAGTGA CGTTAGAAGG TCACAAAAAC
TACATATCCA CTATTTCAAT TATACCAAAT AAAAATTGTA TTGTATCGTC TTCACATGAT
GAAACTCTTA AGGTGTGGGA TTTAGATAGA GGAATAGACA CAATAACTCT TATTGGTCAT
TCAGGATCAG TAAGTTCAGT AGCAATAACT CCTGATGGAA AGTCTATTGT TTCGGCTTCA
GGAGATGGTA CACATAAAAT ATGGAGTTTG GAGAACAGAG AAGAAATAGC AACTTTGGAA
GGTCATAAAT CTGCACCATC AACAATTGTG ATCACACCGG ATGGAAAATA TGCAGTTTCA
GCTTCATATG ATAGAACCAT TAAGATTTTG GATTTAAAAA AACAAATAGT AAAAACGTCA
CTTAGAGGAC ATACTGATTC TGCCACTTTA GTCGCAGTCA CTTCTAATTC ACGGTATGTT
GTTTCAGCTT CTAGAGATAA TACCCTTAGG GTATGGGATT TAGAAAGTAG TAGCGAAGTT
TCTTGCTTTA CAGGAGATGT TCCATTTACA GCTTTTGATA TTTTGAAAGA TGAAAATATT
ATTGTTGTTG GAGATTCTTT GGGAAAAGTT TATTTTTTCC ATTTGCATAT ACCCTGTAAA
AATAACTTTT ACTTCTAA
 
Protein sequence
MATLRGHEKV FSIAVTPNGK YAVSGSHDGT LKVWDLEKWR EIRSLRAHSK SITAFAITSD 
GKLVVLGSLD GNLEVWNLET GEEKAAFKEH SEPITEIVIT PDGKRAVSGS SDNTLKVWDL
EKMEELTTLI SHSNSVSKIA ITPSGKYAIS GSSDNTLKVW DLKKLDEETI STGHSKSVNK
IVITPDGKLA VSSSYDGTLK VWDLKTKEEK VTLKGHSGPV TDFVITPDGK RIISGSSDKT
LRVWDLKKGN MTLKGHKREV TSVAITSDGK YAISGSFDRT IKVWDLENGK IKVTLEGHKN
YISTISIIPN KNCIVSSSHD ETLKVWDLDR GIDTITLIGH SGSVSSVAIT PDGKSIVSAS
GDGTHKIWSL ENREEIATLE GHKSAPSTIV ITPDGKYAVS ASYDRTIKIL DLKKQIVKTS
LRGHTDSATL VAVTSNSRYV VSASRDNTLR VWDLESSSEV SCFTGDVPFT AFDILKDENI
IVVGDSLGKV YFFHLHIPCK NNFYF