| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0516 |
|---|
| Symbol | |
|---|
| ID | 3624256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 619866 |
|---|
| End bp | 620555 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637699408 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_304077 |
|---|
| Protein GI | 73668062 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2043] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTAA AAGAGATAAA TAAATATGGA CAAGAACTTG TCGACTGTCT GAAACTAAAG
ACTTCCCCTG TTGCAGTAAA GCTGATCCCG AAAGGAGGGG AAATTCCGGA AGGAATGAAG
GAAGTAGATG AAACTATGAG ACACTGCCAG CTGGTTGACA GAGTGAGAAG AACAGGCGAG
GAGTTCTATA CCCTTATCGA AGACCAGATG TGTAAAGGTG GCGCTGGCGC AATGGGCCTT
GGCGAGATGC CTCCAAAGGT CGCAAGTGGA GAATTTTATT TTAATAAACT CAAACAGTTC
AGCACCCAGG GCGCTGCAAG GCGTACCCTT GAAAGAGTTC CCAAGCTTCC CCCAAACTCA
ACAGAAGCTA TCCTGTACTC TCCTCTGGAA AAAGCCACTT TTACTCCGGA TGTTGTTGTC
GTTATCAGTA ATCCTAAACA AATAATGTTA CTCACACAGG CTGCAATGTA CAAAACCGGA
GGCAGGATCG AAGCGAGTTT TGCAGGAAAG CAGAGCCTGT GCTCCGATGG GGTTGTGAAT
GTATACAAAG AAGGCAAAAT CGGAGTCACA GTCGGTTGCA GCGGCAGCAG AACATACTCC
AAAATCGCAG ACGAAGAAAT GATTATGGGA ATTCCCATTG AACTTCTGGC TGATGTGGCT
GCTGGCCTTA AAGAAATCTG CCCGAAGTAA
|
|---|
| Protein sequence | MDVKEINKYG QELVDCLKLK TSPVAVKLIP KGGEIPEGMK EVDETMRHCQ LVDRVRRTGE
EFYTLIEDQM CKGGAGAMGL GEMPPKVASG EFYFNKLKQF STQGAARRTL ERVPKLPPNS
TEAILYSPLE KATFTPDVVV VISNPKQIML LTQAAMYKTG GRIEASFAGK QSLCSDGVVN
VYKEGKIGVT VGCSGSRTYS KIADEEMIMG IPIELLADVA AGLKEICPK
|
|---|
| |