Gene Mbar_A0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0501 
Symbol 
ID3626615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp599740 
End bp601053 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content43% 
IMG OID637699394 
Producthypothetical protein 
Protein accessionYP_304063 
Protein GI73668048 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1232] Protoporphyrinogen oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG TAATAGTAGG AAGTGGGCTC GCAGGGCTGT CAGCCGCGTA TAAGCTTTGC 
AAATCGAATG AGACTGTTAT TTTTGAAAAA GATGCAGAAA TCGGGGGGAT GGCCTCAAGT
TATTGCCATG ATTTTGCTGG AAAGAGGTAC TTTATAGAGA AATATTATCA CCATATATTC
AGGAGTGATT CGGAACTTCT TGACCTTATA AGAGAACTGG GGCTTGAAGG TCAAATGCTG
TGGCTTAAGG GAAAAAACGC CTATTTTGTG GACGGTAAAA ACTATCCCAT GAATACTCCC
ACTGAAATTC TAAGGTTTAA ACCTCTTTCT TTTACGGATC TGGTAAAACT TGGGCTGCTG
GTGCTTAGAA TAAAGCTAAT AAATGATACG ACTTCCTATG ACAGAGTAAA GGCAAAAACC
TGGATTCTTG ATACGGCGGG GCAATCCGTA TACGAAAATT TTTTTGCTCC TCTCATGAAA
AGCAAATTCG GTGAAAATGC CGAAAACGTT TCTGCAGCCT GGCTTATAGG GCGTGTGAAA
ATAAGGTCAG ATCGTGGAAA AGAAGGAGAA AAACTGGGAT ACCTGAGAGG GGGGTTCAAT
TCTCTAATAG AAGCTCTGGC AAGGGAAATC GCTGCACAGG GGGGCAGGAT CTTACAGAAT
AAAGCAGTAA AGGAAATCGT AATCAAAGAC AATGCAGTGC AGGGAGTGAT TGCAGACTGG
GATTTCATAC CCTGTGATGC CGTGATTTCA ACTGTTGAAC CCAGAGTACT GGATATCCTT
ACAAAAGGCA AACTTGGAAC TCTTCAAGCG ACCCTGCAAG GTATTCGTTA TCAGGGAACT
GCATGTGCCC TCATAGGACT TGATAAAGGG CTTATGAAAA ATGGGAATTA CTGGTTGAAC
ATAAAAGCTG ACGTGCCTTT TGGAGCCGTA ATTGAGCACA CCAATTTTAT GCCTTTTGAG
GACTATGGAG AACACCTCGT TTATGTAACT TCCTATTTCC AGGATGAAAA CGATGCCCTC
TGGCTGAAGA AGGAAGACGA AGTTCTGGAT TCTTACCTGA AGGGCCTGGA AAATATGTTT
CCTGATATTT CAAGAACCGA TATCCACTGG GCAAAACTCT TCCGAAGAAT GGATACTGCA
CCTGTGTATG AACAGGGGTA CCTTGAAAAG GTTCTGCCGT TTGCGCCAGG CCCAACCGGA
CTTTACCTGG CAGGAATGTT CTCATCAACC AATTACCCGG AAAGAAGCAT GAACGGCTCT
GTAAAAGCCG GGTTTAAAGC TGCAAACTTC TTCACGAAAA AAGAAGAGAA TTGA
 
Protein sequence
MKIVIVGSGL AGLSAAYKLC KSNETVIFEK DAEIGGMASS YCHDFAGKRY FIEKYYHHIF 
RSDSELLDLI RELGLEGQML WLKGKNAYFV DGKNYPMNTP TEILRFKPLS FTDLVKLGLL
VLRIKLINDT TSYDRVKAKT WILDTAGQSV YENFFAPLMK SKFGENAENV SAAWLIGRVK
IRSDRGKEGE KLGYLRGGFN SLIEALAREI AAQGGRILQN KAVKEIVIKD NAVQGVIADW
DFIPCDAVIS TVEPRVLDIL TKGKLGTLQA TLQGIRYQGT ACALIGLDKG LMKNGNYWLN
IKADVPFGAV IEHTNFMPFE DYGEHLVYVT SYFQDENDAL WLKKEDEVLD SYLKGLENMF
PDISRTDIHW AKLFRRMDTA PVYEQGYLEK VLPFAPGPTG LYLAGMFSST NYPERSMNGS
VKAGFKAANF FTKKEEN